RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ZNF446Q9NWS9 450 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 ANAPC5Q9UJX4 755 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 LSM7Q9UK45 103 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 TPX2Q9ULW0 747 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 ZNF510Q9Y2H8 683 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 C5orf42Q9H799 3197 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 GFRA2O00451 464 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 CCNCP24863 283 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 AVPR1AP37288 418 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 CDH4P55283 916 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 NTHL1P78549 312 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 WASHC5Q12768 1159 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 MORF4L2Q15014 288 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 TTC39BQ5VTQ0 682 aaPredicted RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 TMC5Q6UXY8 1006 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 C12orf76Q8N812 135 aaPredicted RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 CCDC110Q8TBZ0 833 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 NSUN3Q9H649 340 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 PIDD1Q9HB75 910 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 CFAP97Q9P2B7 532 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 MTRF1LQ9UGC7 380 aaKnown RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 SHOC2Q9UQ13 582 aa9.86□□□□□ -0.83
NPHP1-202ENST00000355301 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
NPHP1-202ENST00000355301 A0A0A0MRY4 1105 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 SMAPO00193 183 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 RNF103O00237 685 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 DFFAO00273 331 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 LEFTY2O00292 366 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 MAFKO60675 156 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 OPHN1O60890 802 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CLDN11O75508 207 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 STK10O94804 968 aaKnown RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 GLP2RO95838 553 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 OR1E1P30953 314 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 YBEYP58557 167 aaPredicted RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 RPS24P62847 133 aaKnown RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 PARP15Q460N3 678 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ANKRD20A2Q5SQ80 823 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ANKRD20A1Q5TYW2 823 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ANKRD20A3Q5VUR7 823 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CHST9Q7L1S5 443 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 HOOK3Q86VS8 718 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CIR1Q86X95 450 aaPredicted RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 PPIL6Q8IXY8 311 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CCDC13Q8IYE1 715 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CFAP52Q8N1V2 620 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 MREGQ8N565 214 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ATPAF2Q8N5M1 289 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ZSCAN18Q8TBC5 510 aaPredicted RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 CPT1BQ92523 772 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 SPATA13Q96N96 652 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 VAT1Q99536 393 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 FUT8Q9BYC5 575 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 TSPYL1Q9H0U9 437 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 ZNF576Q9H609 170 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 TDP1Q9NUW8 608 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 MRPS23Q9Y3D9 190 aaKnown RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 SH3BP1Q9Y3L3 701 aa9.85□□□□□ -0.83
NPHP1-202ENST00000355301 SPTBN5Q9NRC6 3674 aaKnown RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 NYNRINQ9P2P1 1898 aaKnown RBP9.85□□□□□ -0.83
NPHP1-202ENST00000355301 PDE4DIPQ5VU43 2346 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CHD5Q8TDI0 1954 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 A0A1B0GVM2 712 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 E2F8A0AVK6 867 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TCAF2A6NFQ2 919 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 RASA4BC9J798 803 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 KCNK1O00180 336 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 RASA4O43374 803 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ATP8B1O43520 1251 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 RAMP2O60895 175 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 PTPN3P26045 913 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 MAGEA6P43360 314 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 PAPOLAP51003 745 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 HYAL1Q12794 435 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 LRIT3Q3SXY7 679 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ARHGAP36Q6ZRI8 547 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 HDXQ7Z353 690 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TMC3Q7Z5M5 1100 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 ZNF567Q8N184 647 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CPXM2Q8N436 756 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 NAT8LQ8N9F0 302 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SH3RF2Q8TEC5 729 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 FATE1Q969F0 183 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 TXLNGYQ9BZA5 131 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 FOXP3Q9BZS1 431 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 SMG9Q9H0W8 520 aaKnown RBP9.84□□□□□ -0.83
NPHP1-202ENST00000355301 IGFLR1Q9H665 355 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 RAB6BQ9NRW1 208 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 LMCD1Q9NZU5 365 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 CCL26Q9Y258 94 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 C2orf16Q68DN1 1984 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
NPHP1-202ENST00000355301 A0A1W2PPC1 479 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms