RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HTRA2O43464 458 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 BCAS2O75934 225 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 KCNH1O95259 989 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ALDOAP04075 364 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SERPINB2P05120 415 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ERVK-10P10266 1014 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 NR4A1P22736 598 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CCR10P46092 362 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 YAP1P46937 504 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CARTPTQ16568 116 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PTPN20Q4JDL3 420 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ZBTB41Q5SVQ8 909 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 EPGNQ6UW88 154 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ZBTB33Q86T24 672 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 OFCC1Q8IZS5 231 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 IL31RAQ8NI17 732 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GABPB2Q8TAK5 448 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TBC1D15Q8TC07 691 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 COG8Q96MW5 612 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 NACA2Q9H009 215 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 UPF3AQ9H1J1 476 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CISHQ9NSE2 258 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SEPT10Q9P0V9 454 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 NR2E3Q9Y5X4 410 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 KPNA4O00629 521 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 APOL1O14791 398 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 BAIAP3O94812 1187 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 HMGCRP04035 888 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GNAO1P09471 354 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 S100A1P23297 94 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GLRBP48167 497 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PSME3P61289 254 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TUBA4AP68366 448 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TFAMQ00059 246 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TSPY1Q01534 308 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PMS2P3Q13401 168 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 BFSP2Q13515 415 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 DPYSQ14117 519 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM132AQ24JP5 1023 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SH3PXD2AQ5TCZ1 1133 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SCARA3Q6AZY7 606 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SIAH1Q8IUQ4 282 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM126BQ8IUX1 230 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PDZD8Q8NEN9 1154 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 HM13Q8TCT9 377 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 LPGAT1Q92604 370 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PBXIP1Q96AQ6 731 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 AKT1S1Q96B36 256 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CNDP1Q96KN2 507 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SNX27Q96L92 541 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SLC2A11Q9BYW1 496 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 RPF2Q9H7B2 306 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 FBXO28Q9NVF7 368 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CDYLQ9Y232 598 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PCDHA11Q9Y5I1 949 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 FAM159BA6NKW6 160 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 A8MU76 341 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TRIM38O00635 465 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TRIM13O60858 407 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PIGNO95427 931 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GARTP22102 1010 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TCF7P36402 384 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 RAB15P59190 212 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 MYL6P60660 151 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TXNL4AP83876 142 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 USP41Q3LFD5 358 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CCDC153Q494R4 210 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 MTERF2Q49AM1 385 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GLRA4Q5JXX5 417 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GK5Q6ZS86 529 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TICAM1Q8IUC6 712 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ZC3H7AQ8IWR0 971 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ARFGAP1Q8N6T3 406 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 SNX31Q8N9S9 440 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 TFAP2BQ92481 460 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GMCL1Q96IK5 515 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 MRPL46Q9H2W6 279 aaKnown RBP7.79□□□□□ -1.16
BRCA1-201ENST00000352993 IL1RL2Q9HB29 575 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ASNSD1Q9NWL6 643 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 MKS1Q9NXB0 559 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GPRC5DQ9NZD1 345 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 GABBR1Q9UBS5 961 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 CCPG1Q9ULG6 757 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ATP11BQ9Y2G3 1177 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PCDHB12Q9Y5F1 795 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 ST14Q9Y5Y6 855 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 PSAT1Q9Y617 370 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 KCNU1A8MYU2 1149 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CLOCKO15516 846 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 BMP10O95393 424 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 METTL18O95568 372 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CCNA2P20248 432 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CNTFP26441 200 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 RCVRNP35243 200 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 DPP6P42658 865 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms