RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 TANC1Q9C0D5 1861 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 TOMM70O94826 608 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 ENDOD1O94919 500 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 MMP10P09238 476 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SUPT20HL2P0C7V6 817 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 KCNA4P22459 653 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 NFKBIAP25963 317 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 EFNA5P52803 228 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SOX10P56693 466 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 ACTR2P61160 394 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 GALNT2Q10471 571 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 NRF1Q16656 503 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SUPT20HL1Q3ZLR7 823 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 CAND1Q86VP6 1230 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SNX32Q86XE0 403 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 C10orf107Q8IVU9 208 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 WDTC1Q8N5D0 677 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 PCYOX1LQ8NBM8 494 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 MCUQ8NE86 351 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 TNIP2Q8NFZ5 429 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 OR5B17Q8NGF7 314 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 STON2Q8WXE9 905 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC7A3Q8WY07 619 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 ATP2A3Q93084 1043 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 TOP1MTQ969P6 601 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 UHRF1Q96T88 793 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 GLIS2Q9BZE0 524 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 ARMC7Q9H6L4 198 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 TMEM9Q9P0T7 183 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 CDC14AQ9UNH5 594 aa10.55□□□□□ -0.72
CHRNA1-202ENST00000348749 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 IQCA1LA6NCM1 817 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 YDJCA8MPS7 323 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 GIPC1O14908 333 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SPTLC1O15269 473 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 HTRA2O43464 458 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SNAP91O60641 907 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 KLHL41O60662 606 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PRKCGP05129 697 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 RALBP11234 206 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CYP2C9P11712 490 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 IL1R2P27930 398 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 MAGEA3P43357 314 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 BMXP51813 675 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CDH15P55291 814 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 ATP1A4Q13733 1029 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DUOXA2Q1HG44 320 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 IRAK1BP1Q5VVH5 260 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 EGFLAMQ63HQ2 1017 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CPSF7Q8N684 471 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 KCTD6Q8NC69 237 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DEPDC1BQ8WUY9 529 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DUS3LQ96G46 650 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CNDP2Q96KP4 475 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 NPLQ9BXD5 320 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 FAM124BQ9H5Z6 455 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 WDR41Q9HAD4 459 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 CXorf21Q9HAI6 301 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 ASNSD1Q9NWL6 643 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 COPG2Q9UBF2 871 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 KAT6AQ92794 2004 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 ZNF487B1APH4 448 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 TRIM38O00635 465 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 LSM1O15116 133 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 AQP9O43315 295 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 FOXD2O60548 495 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 TADA2AO75478 443 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 P4HA1P13674 534 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PTPN2P17706 415 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 RFC1P35251 1148 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 DPP6P42658 865 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PSMD8P48556 350 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 NRLP54845 237 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PKNOX1P55347 436 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 NR1D2Q14995 579 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SMTNL2Q2TAL5 461 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 SLC9B1Q4ZJI4 515 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 AARS2Q5JTZ9 985 aaKnown RBP10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 IL23RQ5VWK5 629 aa10.54□□□□□ -0.72
CHRNA1-202ENST00000348749 ANKRD26P1Q6NSI1 321 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms