RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ATXN3LQ9H3M9 355 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 IGSF9Q9P2J2 1179 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MSRAQ9UJ68 235 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CLUHO75153 1309 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 E7ESA3 106 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 KCNK1O00180 336 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MATN3O15232 486 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CACNG3O60359 315 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 OPHN1O60890 802 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TMEM63AO94886 807 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CSPG5O95196 566 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 FGF19O95750 216 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PTPN3P26045 913 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 FDFT1P37268 417 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 YBEYP58557 167 aaPredicted RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 SMAD3P84022 425 aaKnown RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 GAD2Q05329 585 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 SEMA5AQ13591 1074 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 RAB30Q15771 203 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PARP6Q2NL67 630 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CFAP58Q5T655 872 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 RFWD3Q6PCD5 774 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 LRIG3Q6UXM1 1119 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ARHGAP36Q6ZRI8 547 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 HTR3DQ70Z44 454 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TRMT10CQ7L0Y3 403 aaKnown RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 ADGRD2Q7Z7M1 963 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 KLHDC8BQ8IXV7 354 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 LGI2Q8N0V4 545 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MAB21L3Q8N8X9 362 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MCUQ8NE86 351 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 SHKBP1Q8TBC3 707 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 FATE1Q969F0 183 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 TCEAL4Q96EI5 215 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TEKT5Q96M29 485 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 ZIM3Q96PE6 472 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 VAT1Q99536 393 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 FERMT1Q9BQL6 677 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PHACTR1Q9C0D0 580 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CERS4Q9HA82 394 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ASAH2Q9NR71 780 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ZDHHC7Q9NXF8 308 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 DPP7Q9UHL4 492 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TRHDEQ9UKU6 1024 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CPQQ9Y646 472 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 A0A1W2PRU2 124 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 EPOPA6NHQ4 379 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 RASA4BC9J798 803 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 F5H5T6 163 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 RNF103O00237 685 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 EIF3HO15372 352 aaKnown RBP eCLIP11.25□□□□□ -0.61
ECM1-201ENST00000346569 RASA4O43374 803 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 TTC4O95801 387 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 SYF2O95926 243 aaKnown RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 PEX11BO96011 259 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 JCHAINP01591 159 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 RHOP08100 348 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 MYL4P12829 197 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 GJA1P17302 382 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 CD68P34810 354 aaPredicted RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 MAPKAPK2P49137 400 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 CDH4P55283 916 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 IFI35P80217 286 aaPredicted RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 BASP1P80723 227 aaKnown RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 DUSP6Q16828 381 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 PRSS36Q5K4E3 855 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 FNBP1LQ5T0N5 605 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 GPR153Q6NV75 609 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 POTEHQ6S545 545 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 CEP128Q6ZU80 1094 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 PID1Q7Z2X4 250 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 TAB3Q8N5C8 712 aaPredicted RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 CNTD1Q8N815 330 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 MAML1Q92585 1016 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 EXOC4Q96A65 974 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 RBM15Q96T37 977 aaKnown RBP eCLIP11.25□□□□□ -0.615e-8■■■■■ 28.6
ECM1-201ENST00000346569 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 SH3GL2Q99962 352 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 CDC42EP4Q9H3Q1 356 aaKnown RBP11.25□□□□□ -0.61
ECM1-201ENST00000346569 TRPC7Q9HCX4 862 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 SMPD4Q9NXE4 827 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 OGFRQ9NZT2 677 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 DOCK4Q8N1I0 1966 aa11.25□□□□□ -0.61
ECM1-201ENST00000346569 DOCK6Q96HP0 2047 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms