RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 AVILO75366 819 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CSH1P0DML2 217 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 CSH2P0DML3 217 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 FGFR1P11362 822 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 FMO5P49326 533 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 NEK3P51956 506 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 AQP5P55064 265 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 STXBP1P61764 594 aaKnown RBP17.93■□□□□ 0.46
SMAD4-201ENST00000342988 KLHL23Q8NBE8 558 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.93■□□□□ 0.46
SMAD4-201ENST00000342988 RP1P56715 2156 aa17.93■□□□□ 0.46
SMAD4-201ENST00000342988 DGAT1O75907 488 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PTGISQ16647 500 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 NAIF1Q69YI7 327 aaPredicted RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 RERGQ96A58 199 aaPredicted RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ACOX2Q99424 681 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 RAD17O75943 681 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PCDH8O95206 1070 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 UGT2B15P54855 530 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SNRNP35Q16560 246 aaKnown RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 OR56A4Q8NGH8 313 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF224Q9NZL3 707 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 H3BUI4 141 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SNAP23O00161 211 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 NOS2P35228 1153 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SLC7A2P52569 658 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 EIF5AL1Q6IS14 154 aaKnown RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CHERPQ8IWX8 916 aaKnown RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SUN5Q8TC36 379 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 MED28Q9H204 178 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ADGRG1Q9Y653 693 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 GTPBP1O00178 669 aaKnown RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 OR10H2O60403 315 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 RPS2P15880 293 aaKnown RBP17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CXCR2P25025 360 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 MBTD1Q05BQ5 628 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 DENND5AQ6IQ26 1287 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF621Q6ZSS3 439 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 MND1Q9BWT6 205 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 TSPAN4O14817 238 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 DGCR6Q14129 220 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PANX3Q96QZ0 392 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 TMEM8AQ9HCN3 771 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 FAM49BQ9NUQ9 324 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PSMD13Q9UNM6 376 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CHL1O00533 1208 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 NAB2Q15742 525 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 GXYLT1Q4G148 440 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 BOLA3Q53S33 107 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 CDKL4Q5MAI5 379 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SH2D3CQ8N5H7 860 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 TMEM120AQ9BXJ8 343 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PLEKHA1Q9HB21 404 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 C3orf18Q9UK00 162 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 USP17L8P0C7I0 530 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PPP2R2BQ00005 443 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 TMPRSS6Q8IU80 811 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 HPDLQ96IR7 371 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 MARCH7Q9H992 704 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 THAP1Q9NVV9 213 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 PLEKHG2Q9H7P9 1386 aa17.92■□□□□ 0.46
SMAD4-201ENST00000342988 SASH3O75995 380 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PLEKHA8P1O95397 391 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 IL18Q14116 193 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 AAGABQ6PD74 315 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 KDM7AQ6ZMT4 941 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TRMT11Q7Z4G4 463 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TRNT1Q96Q11 434 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 METTL8Q9H825 291 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 SLC28A1O00337 649 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 MAFKO60675 156 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 OR56A5P0C7T3 313 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ARMCX1Q9P291 453 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 MORF4L1Q9UBU8 362 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ANGPT4Q9Y264 503 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PTCH1Q13635 1447 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 FCHO1O14526 889 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 KRT36O76013 467 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 MTHFD1P11586 935 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 COX7A2P14406 83 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TCF7P36402 384 aaPredicted RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 NR2C2P49116 596 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 TMBIM6P55061 237 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF276Q8N554 614 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 RIT1Q92963 219 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ZHX1-C8orf76Q96EF9 292 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PCDH18Q9HCL0 1135 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 GIMD1P0DJR0 217 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 CLK2P49760 499 aaKnown RBP17.91■□□□□ 0.46
SMAD4-201ENST00000342988 ACAP1Q15027 740 aa17.91■□□□□ 0.46
SMAD4-201ENST00000342988 PTPAQ15257 358 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms