RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 STAMBPL1Q96FJ0 436 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 TMEM169Q96HH4 297 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 TEKT5Q96M29 485 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 PIH1D1Q9NWS0 290 aaKnown RBP20.48■□□□□ 0.87
RTN1-202ENST00000342503 SENP1Q9P0U3 644 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 AFF4Q9UHB7 1163 aaKnown RBP20.48■□□□□ 0.87
RTN1-202ENST00000342503 SDR42E2A6NKP2 422 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 KIAA0355O15063 1070 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 SPAG7O75391 227 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 FAM107AO95990 144 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 IGLV3-27P01718 113 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 ACRP10323 421 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 PRKCHP24723 683 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 MGAT1P26572 445 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 SESN2P58004 480 aaPredicted RBP20.47■□□□□ 0.87
RTN1-202ENST00000342503 DSG1Q02413 1049 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 CMTR2Q8IYT2 770 aaKnown RBP20.47■□□□□ 0.87
RTN1-202ENST00000342503 USP33Q8TEY7 942 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 MZB1Q8WU39 189 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 SLC44A1Q8WWI5 657 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 BTN2A3PQ96KV6 586 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 CEP295NLQ96MC4 621 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 MLPHQ9BV36 600 aaPredicted RBP20.47■□□□□ 0.87
RTN1-202ENST00000342503 FAM107BQ9H098 131 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 CCDC134Q9H6E4 229 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 TLR5O60602 858 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 ABLIM3O94929 683 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 AP2A1O95782 977 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 RAG1P15918 1043 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 IFNAR2P48551 515 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 OLIG2Q13516 323 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 C4orf33Q8N1A6 199 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 GSDMBQ8TAX9 411 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 SMC6Q96SB8 1091 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 MLXIPLQ9NP71 852 aa20.47■□□□□ 0.87
RTN1-202ENST00000342503 PPARGC1AQ9UBK2 798 aaKnown RBP20.47■□□□□ 0.87
RTN1-202ENST00000342503 ARHGAP42A6NI28 874 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 CXorf49A8MYA2 514 aaPredicted RBP20.46■□□□□ 0.87
RTN1-202ENST00000342503 MAFKO60675 156 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 SUN1O94901 812 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 LAG3P18627 525 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 CRADDP78560 199 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 RAP1GAP2Q684P5 730 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 KCTD11Q693B1 232 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 PPM1NQ8N819 430 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 ZNF461Q8TAF7 563 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 DYDC1Q8WWB3 177 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 CHMP6Q96FZ7 201 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 ZYG11BQ9C0D3 744 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 SMYD2Q9NRG4 433 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 NKIRAS1Q9NYS0 192 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 IKBKGQ9Y6K9 419 aa20.46■□□□□ 0.87
RTN1-202ENST00000342503 FAM47DPA6NHR8 397 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 PRPF4O43172 522 aaKnown RBP eCLIP20.45■□□□□ 0.86
RTN1-202ENST00000342503 EFCAB14O75071 495 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 INHBAP08476 426 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 CCNB1P14635 433 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 RHOQP17081 205 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 PAPOLAP51003 745 aaKnown RBP20.45■□□□□ 0.86
RTN1-202ENST00000342503 RING1Q06587 406 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 STEAP4Q687X5 459 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 CASC4Q6P4E1 433 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 CTAGE3PQ8IX95 158 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 CNTD1Q8N815 330 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 OR52K1Q8NGK4 314 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 SYBUQ9NX95 663 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 SPG21Q9NZD8 308 aa20.45■□□□□ 0.86
RTN1-202ENST00000342503 MATN3O15232 486 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 CNTN5O94779 1100 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 HSPA8P11142 646 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 DRD4P21917 467 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 TPGS2Q68CL5 300 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 FBXL22Q6P050 247 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 TRMT10BQ6PF06 316 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 OTOP3Q7RTS5 596 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 NECAB2Q7Z6G3 386 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 SLC26A11Q86WA9 606 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 TMEM199Q8N511 208 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ARNTL2Q8WYA1 636 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 IGSF8Q969P0 613 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ZNF317Q96PQ6 595 aaPredicted RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 IL12RB2Q99665 862 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 NOL6Q9H6R4 1146 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 CYP4F11Q9HBI6 524 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 FNIP2Q9P278 1114 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 HSFX1Q9UBD0 423 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 IGLV3-10A0A075B6K4 115 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 IQANK1A0A1B0GTG1 560 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 FAM159BA6NKW6 160 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ERI2A8K979 691 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 USP12O75317 370 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 FAM155BO75949 473 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 HMGA1P17096 107 aaKnown RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 KPNA1P52294 538 aaPredicted RBP20.44■□□□□ 0.86
RTN1-202ENST00000342503 PRPSAP1Q14558 356 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 QPCTQ16769 361 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 ALFQ53S48 1182 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 NUGGCQ68CJ6 796 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 TFAP2DQ7Z6R9 452 aa20.44■□□□□ 0.86
RTN1-202ENST00000342503 DDX53Q86TM3 631 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms