RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SEMA4FO95754 770 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 CHRNB2P17787 502 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 JAM2P57087 298 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 CENPCQ03188 943 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 C5orf22Q49AR2 442 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 CXorf57Q6NSI4 855 aaKnown RBP20.76■□□□□ 0.91
SYNE2-201ENST00000341472 LRSAM1Q6UWE0 723 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 ZCCHC9Q8N567 271 aaKnown RBP20.76■□□□□ 0.91
SYNE2-201ENST00000341472 DEFB124Q8NES8 71 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 NEK11Q8NG66 645 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 FEM1AQ9BSK4 669 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 ADAM33Q9BZ11 813 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 ZDHHC5Q9C0B5 715 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 PABPC3Q9H361 631 aaKnown RBP20.76■□□□□ 0.91
SYNE2-201ENST00000341472 C6orf106Q9H6K1 298 aaPredicted RBP20.76■□□□□ 0.91
SYNE2-201ENST00000341472 FBXL12Q9NXK8 326 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 TMEM59LQ9UK28 342 aa20.76■□□□□ 0.91
SYNE2-201ENST00000341472 UPK3BL1B0FP48 263 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 UPK3BL2E5RIL1 263 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 FLT3P36888 993 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 GGCXP38435 758 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 CDH4P55283 916 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 SEMA3BQ13214 749 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 NCAPHQ15003 741 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 ACBD5Q5T8D3 534 aaPredicted RBP20.75■□□□□ 0.91
SYNE2-201ENST00000341472 LRRC31Q6UY01 552 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 TRIM72Q6ZMU5 477 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 USP30Q70CQ3 517 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 ARCQ7LC44 396 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 MMAAQ8IVH4 418 aaKnown RBP20.75■□□□□ 0.91
SYNE2-201ENST00000341472 ALG14Q96F25 216 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 C1orf74Q96LT6 269 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 FAM129BQ96TA1 746 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 NAT10Q9H0A0 1025 aaKnown RBP20.75■□□□□ 0.91
SYNE2-201ENST00000341472 ANLNQ9NQW6 1124 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 ACACBO00763 2458 aa20.75■□□□□ 0.91
SYNE2-201ENST00000341472 DRGXA6NNA5 263 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 CYP1A1P04798 512 aaPredicted RBP20.74■□□□□ 0.91
SYNE2-201ENST00000341472 MMP8P22894 467 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 LAMA1P25391 3075 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 PMLP29590 882 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 SLC8A1P32418 973 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 NUMBP49757 651 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 STK19P49842 368 aaPredicted RBP20.74■□□□□ 0.91
SYNE2-201ENST00000341472 IRAK1P51617 712 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 FMO1Q01740 532 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 TYRO3Q06418 890 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 CST6Q15828 149 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 STK40Q8N2I9 435 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 OR2I1PQ8NGU4 316 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 SNX19Q92543 992 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 PTPRN2Q92932 1015 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 DNAAF2Q9NVR5 837 aaKnown RBP20.74■□□□□ 0.91
SYNE2-201ENST00000341472 TBC1D30Q9Y2I9 924 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.74■□□□□ 0.91
SYNE2-201ENST00000341472 SNX10Q9Y5X0 201 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 ITIH6Q6UXX5 1313 aa20.74■□□□□ 0.91
SYNE2-201ENST00000341472 MID1O15344 667 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 CNTN5O94779 1100 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 FSBPO95073 299 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 VASPP50552 380 aaPredicted RBP20.73■□□□□ 0.91
SYNE2-201ENST00000341472 GRIK2Q13002 908 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 ACCSLQ4AC99 568 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 PHLDB2Q86SQ0 1253 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 PIP4P1Q86T03 277 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 C1orf216Q8TAB5 229 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 SLC30A5Q8TAD4 765 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 CNTNAP3BQ96NU0 1288 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 ERGIC2Q96RQ1 377 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 HAPLN3Q96S86 360 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 OMDQ99983 421 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 CNTNAP3Q9BZ76 1288 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 NEUROG2Q9H2A3 272 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 VPS28Q9UK41 221 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 ANGPTL2Q9UKU9 493 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 OR51B4Q9Y5P0 310 aa20.73■□□□□ 0.91
SYNE2-201ENST00000341472 NUP205Q92621 2012 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 FAM47DPA6NHR8 397 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 I6L893 689 aaPredicted RBP20.72■□□□□ 0.91
SYNE2-201ENST00000341472 RNASEH2AO75792 299 aaKnown RBP20.72■□□□□ 0.91
SYNE2-201ENST00000341472 RDXP35241 583 aaKnown RBP20.72■□□□□ 0.91
SYNE2-201ENST00000341472 ZNF252P-AS1Q0IIN9 211 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 SLC14A1Q13336 389 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 TRNP1Q6NT89 227 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 ZNF683Q8IZ20 524 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 OR52K2Q8NGK3 314 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 BIRC7Q96CA5 298 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 CFAP57Q96MR6 1250 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 PCDHB18PQ96TA0 734 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 MUC3BQ9H195 1237 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 SLC25A13Q9UJS0 675 aa20.72■□□□□ 0.91
SYNE2-201ENST00000341472 A0A1W2PP55 124 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 ATP9BO43861 1147 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 SRGAP2O75044 1071 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 ENDOD1O94919 500 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 IL1BP01584 269 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 RHOCP08134 193 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 CD59P13987 128 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 VAV1P15498 845 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 GOT1P17174 413 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms