RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ALDH1A3P47895 512 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 TMED2Q15363 201 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ANO4Q32M45 955 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 C5orf22Q49AR2 442 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 KCTD11Q693B1 232 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 C14orf80Q86SX3 495 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 TCEAL8Q8IYN2 117 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 GSDMBQ8TAX9 411 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 STAMBPL1Q96FJ0 436 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 PAFAH2Q99487 392 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 IL12RB2Q99665 862 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 PRMT1Q99873 361 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 TBK1Q9UHD2 729 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ZNF180Q9UJW8 692 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 SMG5Q9UPR3 1016 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 PCDHB12Q9Y5F1 795 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 PCDHA11Q9Y5I1 949 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 IKBKGQ9Y6K9 419 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 NUP205Q92621 2012 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 MYO18AQ92614 2054 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 IQANK1A0A1B0GTG1 560 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 GMNCA6NCL1 334 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ZNF840PA6NDX5 716 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ZBTB24O43167 697 aaPredicted RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 PRPF4O43172 522 aaKnown RBP eCLIP16.64■□□□□ 0.254e-7■■□□□ 13.5
HPS1-202ENST00000338546 MAFKO60675 156 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 TBX18O95935 607 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 HMGA1P17096 107 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 PPIGQ13427 754 aaKnown RBP eCLIP16.64■□□□□ 0.252e-8■■□□□ 11.8
HPS1-202ENST00000338546 FRG1Q14331 258 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 VEPH1Q14D04 833 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ZSCAN26Q16670 478 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 HECTD3Q5T447 861 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ARMC3Q5W041 872 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 CAPN12Q6ZSI9 719 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 BCAS4Q8TDM0 211 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 ALKBH8Q96BT7 664 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 SGSM3Q96HU1 749 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 CELF6Q96J87 481 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 SLC39A8Q9C0K1 460 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 LRRC40Q9H9A6 602 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 RXFP1Q9HBX9 757 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 TRPM5Q9NZQ8 1165 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 UXTQ9UBK9 157 aaPredicted RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 AAR2Q9Y312 384 aaKnown RBP16.64■□□□□ 0.25
HPS1-202ENST00000338546 NR2E3Q9Y5X4 410 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 TMEM120BA0PK00 339 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 MAGEB16A2A368 324 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 ARHGAP42A6NI28 874 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 DFFAO00273 331 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 SEC24AO95486 1093 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 JCHAINP01591 159 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 CCNB1P14635 433 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 KRT15P19012 456 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 CD68P34810 354 aaPredicted RBP16.63■□□□□ 0.25
HPS1-202ENST00000338546 MAPKAPK2P49137 400 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 HTRA4P83105 476 aaPredicted RBP16.63■□□□□ 0.25
HPS1-202ENST00000338546 ZBTB17Q13105 803 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 PLD1Q13393 1074 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 LGSNQ5TDP6 509 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 UNC5AQ6ZN44 842 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 LINC00523Q86TU6 105 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 SLC26A11Q86WA9 606 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 LRRC6Q86X45 466 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 MIB1Q86YT6 1006 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 NETO2Q8NC67 525 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 MDM1Q8TC05 714 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 ATXN2LQ8WWM7 1075 aaKnown RBP16.63■□□□□ 0.25
HPS1-202ENST00000338546 TTC17Q96AE7 1141 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 ZNF512Q96ME7 567 aaPredicted RBP16.63■□□□□ 0.25
HPS1-202ENST00000338546 FCRL5Q96RD9 977 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 CCSER2Q9H7U1 834 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 NKIRAS1Q9NYS0 192 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
HPS1-202ENST00000338546 TTLL3Q9Y4R7 772 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
HPS1-202ENST00000338546 DOCK4Q8N1I0 1966 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 C2CD2LO14523 706 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 LILRB3O75022 631 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 ANXA9O76027 345 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 FAM107AO95990 144 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 C1QAP02745 245 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 INHBAP08476 426 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 PGAM1P18669 254 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 ELF1P32519 619 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 NPY2RP49146 381 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 YBEYP58557 167 aaPredicted RBP16.62■□□□□ 0.25
HPS1-202ENST00000338546 TNK2Q07912 1038 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms