RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SLC1A5Q15758 541 aa8.78□□□□□ -1
TDP1-201ENST00000335725 FSCBQ5H9T9 825 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GRTP1Q5TC63 336 aa8.78□□□□□ -1
TDP1-201ENST00000335725 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
TDP1-201ENST00000335725 C12orf56Q8IXR9 622 aa8.78□□□□□ -1
TDP1-201ENST00000335725 LRRC47Q8N1G4 583 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 PNPT1Q8TCS8 783 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 MCOLN3Q8TDD5 553 aa8.78□□□□□ -1
TDP1-201ENST00000335725 IPCEF1Q8WWN9 437 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 CCDC124Q96CT7 223 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 CDCA5Q96FF9 252 aa8.78□□□□□ -1
TDP1-201ENST00000335725 PRR11Q96HE9 360 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 TEKT5Q96M29 485 aa8.78□□□□□ -1
TDP1-201ENST00000335725 POLR1BQ9H9Y6 1135 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CYP4F11Q9HBI6 524 aa8.78□□□□□ -1
TDP1-201ENST00000335725 IFT46Q9NQC8 304 aa8.78□□□□□ -1
TDP1-201ENST00000335725 TCEAL9Q9UHQ7 104 aa8.78□□□□□ -1
TDP1-201ENST00000335725 DENND2AQ9ULE3 1009 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GINS2Q9Y248 185 aa8.78□□□□□ -1
TDP1-201ENST00000335725 LAMA4Q16363 1823 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CYP3A7-CYP3A51PA0A087WV96 503 aa8.78□□□□□ -1
TDP1-201ENST00000335725 F8W036 122 aa8.78□□□□□ -1
TDP1-201ENST00000335725 STX16-NPEPL1H3BU86 382 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GREM1O60565 184 aa8.78□□□□□ -1
TDP1-201ENST00000335725 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 WDPCPO95876 746 aa8.78□□□□□ -1
TDP1-201ENST00000335725 H2AFZP0C0S5 128 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SLC5A1P13866 664 aa8.78□□□□□ -1
TDP1-201ENST00000335725 AOC1P19801 751 aa8.78□□□□□ -1
TDP1-201ENST00000335725 MMP8P22894 467 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CYP3A7P24462 503 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GABRB3P28472 473 aa8.78□□□□□ -1
TDP1-201ENST00000335725 RFC4P35249 363 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CPOXP36551 454 aa8.78□□□□□ -1
TDP1-201ENST00000335725 UBE3AQ05086 875 aa8.78□□□□□ -1
TDP1-201ENST00000335725 RIPPLY1Q0D2K3 151 aa8.78□□□□□ -1
TDP1-201ENST00000335725 PLD1Q13393 1074 aa8.78□□□□□ -1
TDP1-201ENST00000335725 TAF1CQ15572 869 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 HMBOX1Q6NT76 420 aa8.78□□□□□ -1
TDP1-201ENST00000335725 H2AFVQ71UI9 128 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CATSPER4Q7RTX7 472 aa8.78□□□□□ -1
TDP1-201ENST00000335725 TSPYL5Q86VY4 417 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 GANCQ8TET4 914 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GTF2H4Q92759 462 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ASB2Q96Q27 587 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SEC22CQ9BRL7 303 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CNPY3Q9BT09 278 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ACAD9Q9H845 621 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ZNF556Q9HAH1 456 aa8.78□□□□□ -1
TDP1-201ENST00000335725 NGRNQ9NPE2 291 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 ACOXLQ9NUZ1 547 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CYB5R1Q9UHQ9 305 aa8.78□□□□□ -1
TDP1-201ENST00000335725 EVLQ9UI08 416 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 MAN2B2Q9Y2E5 1009 aa8.78□□□□□ -1
TDP1-201ENST00000335725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 XRN1Q8IZH2 1706 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 CLUHO75153 1309 aa8.78□□□□□ -1
TDP1-201ENST00000335725 EPHB6O15197 1021 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GMDSO60547 372 aa8.78□□□□□ -1
TDP1-201ENST00000335725 VNN1O95497 513 aa8.78□□□□□ -1
TDP1-201ENST00000335725 KRT1P04264 644 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CAPNS1P04632 268 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SERPINA6P08185 405 aa8.78□□□□□ -1
TDP1-201ENST00000335725 MX2P20592 715 aa8.78□□□□□ -1
TDP1-201ENST00000335725 UQCRC1P31930 480 aa8.78□□□□□ -1
TDP1-201ENST00000335725 PRIM2P49643 509 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CYP4F8P98187 520 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CARTPTQ16568 116 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SPATC1Q76KD6 591 aa8.78□□□□□ -1
TDP1-201ENST00000335725 NEK8Q86SG6 692 aa8.78□□□□□ -1
TDP1-201ENST00000335725 NKAIN4Q8IVV8 208 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CPNE9Q8IYJ1 553 aa8.78□□□□□ -1
TDP1-201ENST00000335725 OR6F1Q8NGZ6 308 aa8.78□□□□□ -1
TDP1-201ENST00000335725 FBXO27Q8NI29 283 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SNX19Q92543 992 aa8.78□□□□□ -1
TDP1-201ENST00000335725 MYDGFQ969H8 173 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ART5Q96L15 291 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ZNF597Q96LX8 424 aa8.78□□□□□ -1
TDP1-201ENST00000335725 C12orf57Q99622 126 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CINPQ9BW66 212 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
TDP1-201ENST00000335725 INTS2Q9H0H0 1204 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 NINJ2Q9NZG7 142 aa8.78□□□□□ -1
TDP1-201ENST00000335725 TRMT6Q9UJA5 497 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 ITGA11Q9UKX5 1188 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ADAMTS13Q76LX8 1427 aa8.77□□□□□ -1
TDP1-201ENST00000335725 FOXO6A8MYZ6 492 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 TMX2-CTNND1H3BSU7 103 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 PLD2O14939 933 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 APOA1P02647 267 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 RAB3AP20336 220 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 DDOSTP39656 456 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 TBX4P57082 545 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 EIF4A1P60842 406 aaKnown RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 OR7E24Q6IFN5 339 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 SYDE1Q6ZW31 735 aaPredicted RBP8.77□□□□□ -1.01
TDP1-201ENST00000335725 CCDC185Q8N715 623 aa8.77□□□□□ -1.01
TDP1-201ENST00000335725 HTRA1Q92743 480 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms