RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 MDM4O15151 490 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 FTH1P19P0C7X4 201 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 GNA15P30679 374 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 CLCN1P35523 988 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PXNP49023 591 aaPredicted RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 SGSHP51688 502 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PTK2Q05397 1052 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 LPAL2Q16609 132 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 EXOC3L4Q17RC7 722 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 FNDC3BQ53EP0 1204 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 KLHDC7AQ5VTJ3 777 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 SERPINA13PQ6UXR4 307 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 TPGS1Q6ZTW0 290 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PROSER1Q86XN7 944 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PHF13Q86YI8 300 aaPredicted RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 MFN1Q8IWA4 741 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PDCD7Q8N8D1 485 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 KCTD5Q9NXV2 234 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 DONSONQ9NYP3 566 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 ACSL6Q9UKU0 697 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 STAP1Q9ULZ2 295 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 TRIM49BA6NDI0 452 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PATE3B3GLJ2 98 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 PRAMEF26H0Y7S4 382 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 ADPRHP54922 357 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 SKOR1P84550 965 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 ZNF211Q13398 564 aaPredicted RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 TMEM259Q4ZIN3 620 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 DCAF17Q5H9S7 520 aaPredicted RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 RALGPS1Q5JS13 557 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 TCEAL6Q6IPX3 200 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 KYAT3Q6YP21 454 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 TMEM35BQ8NCS4 154 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 DEFB124Q8NES8 71 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 OR8D1Q8WZ84 308 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 TCEAL3Q969E4 200 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 VOPP1Q96AW1 172 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 FEM1AQ9BSK4 669 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 CPEB1Q9BZB8 566 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 GANQ9H2C0 597 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 TM7SF3Q9NS93 570 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 POLR3BQ9NW08 1133 aaPredicted RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP16-201ENST00000334352 CHMP5Q9NZZ3 219 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 LIMA1Q9UHB6 759 aaKnown RBP6.58□□□□□ -1.36
USP16-201ENST00000334352 LCMT1Q9UIC8 334 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 SLC25A13Q9UJS0 675 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 NEU3Q9UQ49 428 aa6.58□□□□□ -1.36
USP16-201ENST00000334352 SRRM3A6NNA2 597 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 EPHX1P07099 455 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 ITGB7P26010 798 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 EPHA8P29322 1005 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 DRD3P35462 400 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 HCAR3P49019 387 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 TMEM52BQ4KMG9 183 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 SETMARQ53H47 684 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 AFMIDQ63HM1 303 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 NLRP14Q86W24 1093 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 XYLT1Q86Y38 959 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 DCBLD1Q8N8Z6 715 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 TPCN2Q8NHX9 752 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 UBA3Q8TBC4 463 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 WFDC5Q8TCV5 224 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 GPR174Q9BXC1 333 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 TMEM248Q9NWD8 314 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 SFMBT1Q9UHJ3 866 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 CTNND2Q9UQB3 1225 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 GPSM3Q9Y4H4 160 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 TRIM24O15164 1050 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 SIN3BO75182 1162 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 PRNPP04156 253 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 CD38P28907 300 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 ACADVLP49748 655 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 YPEL5P62699 121 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 PTP4A2Q12974 167 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 INO80DQ53TQ3 878 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 PIP5KL1Q5T9C9 394 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 AGBL4Q5VU57 503 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 PRPF39Q86UA1 669 aaKnown RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 SMYD4Q8IYR2 804 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 CCAR2Q8N163 923 aaKnown RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 BIRC7Q96CA5 298 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 ERGIC2Q96RQ1 377 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 ELF4Q99607 663 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 SYT11Q9BT88 431 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 MAGEH1Q9H213 219 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 C6orf106Q9H6K1 298 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 UBE2TQ9NPD8 197 aaPredicted RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 SALL4Q9UJQ4 1053 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 NOCTQ9UK39 431 aaKnown RBP6.57□□□□□ -1.36
USP16-201ENST00000334352 ZMIZ1Q9ULJ6 1067 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 NAALADL1Q9UQQ1 740 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 HS3ST4Q9Y661 456 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 MYOFQ9NZM1 2061 aa6.57□□□□□ -1.36
USP16-201ENST00000334352 A0A1W2PQ67 120 aa6.56□□□□□ -1.36
USP16-201ENST00000334352 LCP1P13796 627 aa6.56□□□□□ -1.36
USP16-201ENST00000334352 CD19P15391 556 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms