RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 LATS1O95835 1130 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 TUBB4AP04350 444 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 ADH5P11766 374 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 CD72P21854 359 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 OR1E1P30953 314 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 CSKP41240 450 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 CTSOP43234 321 aaPredicted RBP16.95■□□□□ 0.3
SHOX-201ENST00000334060 KDSRQ06136 332 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 LMAN2Q12907 356 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 RUNX3Q13761 415 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 TTC27Q6P3X3 843 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 LRRC31Q6UY01 552 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 PRELID2Q8N945 189 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 BRD9Q9H8M2 597 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 ABCB8Q9NUT2 735 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 MRFAP1Q9Y605 127 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 DFFAO00273 331 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 APOL1O14791 398 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
SHOX-201ENST00000334060 RHOQP17081 205 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 GJA4P35212 333 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 CHKAP35790 457 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 OPRD1P41143 372 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 C2orf54Q08AI8 447 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 GEN1Q17RS7 908 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 MFN1Q8IWA4 741 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 YAF2Q8IY57 180 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 GLIS1Q8NBF1 620 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 HJURPQ8NCD3 748 aaPredicted RBP16.95■□□□□ 0.3
SHOX-201ENST00000334060 EZH1Q92800 747 aaPredicted RBP16.95■□□□□ 0.3
SHOX-201ENST00000334060 HINFPQ9BQA5 517 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 TMEM51Q9NW97 253 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
SHOX-201ENST00000334060 A0A1B0GVM2 712 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 TCAF2A6NFQ2 919 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 J3KR12 359 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 GJB3O75712 270 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 VAV1P15498 845 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 TCP1P17987 556 aaKnown RBP16.94■□□□□ 0.3
SHOX-201ENST00000334060 HCAR3P49019 387 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 GDF10P55107 478 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 FUT11Q495W5 492 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 RNF219Q5W0B1 726 aaPredicted RBP16.94■□□□□ 0.3
SHOX-201ENST00000334060 RNF43Q68DV7 783 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 TMCO3Q6UWJ1 677 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 LINGO4Q6UY18 593 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 MTSS1LQ765P7 747 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 MAP7D3Q8IWC1 876 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 ETFBKMTQ8IXQ9 262 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 KIF18AQ8NI77 898 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.94■□□□□ 0.3
SHOX-201ENST00000334060 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 ALG14Q96F25 216 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 LRRC19Q9H756 370 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 RBM12Q9NTZ6 932 aaKnown RBP16.94■□□□□ 0.3
SHOX-201ENST00000334060 DNPEPQ9ULA0 475 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 F5P12259 2224 aa16.94■□□□□ 0.3
SHOX-201ENST00000334060 H0Y626 953 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 CHADO15335 359 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 TULP3O75386 442 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PTPN7P35236 360 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 CDH4P55283 916 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 MPPE1Q53F39 396 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 RABGAP1LQ5R372 815 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 AFMIDQ63HM1 303 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PBKQ96KB5 322 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 MAK16Q9BXY0 300 aaKnown RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 HCN2Q9UL51 889 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 ZNF510Q9Y2H8 683 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 OR51B4Q9Y5P0 310 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 RASA4BC9J798 803 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PRRT4C9JH25 899 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 F5H423 210 aaPredicted RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 RASA4O43374 803 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 CISD3P0C7P0 127 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PRLRP16471 622 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PAPOLAP51003 745 aaKnown RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 CDH18Q13634 790 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 PAFAH1B3Q15102 231 aaKnown RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 ACTRT1Q8TDG2 376 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 ASB2Q96Q27 587 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 DDX47Q9H0S4 455 aaKnown RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 DNAJC17Q9NVM6 304 aaKnown RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 RCOR3Q9P2K3 495 aaPredicted RBP16.93■□□□□ 0.3
SHOX-201ENST00000334060 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
SHOX-201ENST00000334060 SHROOM3Q8TF72 1996 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 TTC24A2A3L6 582 aaPredicted RBP16.92■□□□□ 0.3
SHOX-201ENST00000334060 WASH4PA8MWX3 477 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 K7ERQ8 282 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 PGRMC1O00264 195 aaKnown RBP16.92■□□□□ 0.3
SHOX-201ENST00000334060 MT-CO1P00395 513 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 ETS1P14921 441 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 COPS2P61201 443 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 TERF2Q15554 542 aa16.92■□□□□ 0.3
SHOX-201ENST00000334060 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms