RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 ARHGEF38Q9NXL2 777 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 BFARQ9NZS9 450 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 BAIAP2L1Q9UHR4 511 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 HAO1Q9UJM8 370 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 NUMBLQ9Y6R0 609 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 TPP1O14773 563 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 B4GALT3O60512 393 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 T-ENOLP0DO92 83 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 ERVK-10P10266 1014 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 BST1Q10588 318 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 CHI3L2Q15782 390 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 ATG16L1Q676U5 607 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 RWDD4Q6NW29 188 aaKnown RBP17.8■□□□□ 0.44
DDX28-201ENST00000332395 CLNKQ7Z7G1 428 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 NUDCD3Q8IVD9 361 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 DNAAF3Q8N9W5 541 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 DPF3Q92784 378 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 TEKT5Q96M29 485 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 TMEM237Q96Q45 408 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 TMEM120AQ9BXJ8 343 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 SIK2Q9H0K1 926 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 EBF2Q9HAK2 575 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 RNF186Q9NXI6 227 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 PCDHB8Q9UN66 801 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 NEU3Q9UQ49 428 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 STK38LQ9Y2H1 464 aa17.8■□□□□ 0.44
DDX28-201ENST00000332395 CCDC195A0A1B0GUA6 201 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 CCDC189A1A4V9 331 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 ARHGAP42A6NI28 874 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 CBX6O95503 412 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 BPGMP07738 259 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 ITGA2BP08514 1039 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 ACLYP53396 1101 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 BTBD8Q5XKL5 378 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 ZNF449Q6P9G9 518 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 GLB1LQ6UWU2 654 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 RNF180Q86T96 592 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 C7orf26Q96N11 449 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 RGS18Q9NS28 235 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 TXNDC16Q9P2K2 825 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 HEY2Q9UBP5 337 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 MTO1Q9Y2Z2 717 aaKnown RBP17.79■□□□□ 0.44
DDX28-201ENST00000332395 BIRC5O15392 142 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 CABYRO75952 493 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 DDHD2O94830 711 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 JCHAINP01591 159 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 OR4Q2P0C623 313 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 CKBP12277 381 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 PGFP49763 221 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 BRMS1LQ5PSV4 323 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 CES4AQ5XG92 561 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 KYAT3Q6YP21 454 aaKnown RBP17.79■□□□□ 0.44
DDX28-201ENST00000332395 TMEM135Q86UB9 458 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 RTN4RL1Q86UN2 441 aaPredicted RBP17.79■□□□□ 0.44
DDX28-201ENST00000332395 ZNF280BQ86YH2 543 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 ZSCAN18Q8TBC5 510 aaPredicted RBP17.79■□□□□ 0.44
DDX28-201ENST00000332395 ZNF669Q96BR6 464 aaPredicted RBP17.79■□□□□ 0.44
DDX28-201ENST00000332395 SMOC2Q9H3U7 446 aa17.79■□□□□ 0.44
DDX28-201ENST00000332395 FRMPD3Q5JV73 1810 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 GP5P40197 560 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 COG7P83436 770 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 PDE1CQ14123 709 aaPredicted RBP17.78■□□□□ 0.44
DDX28-201ENST00000332395 CTC1Q2NKJ3 1217 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 ACCSLQ4AC99 568 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 STXBP5Q5T5C0 1151 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 MAB21L3Q8N8X9 362 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDX28-201ENST00000332395 RAB3IL1Q8TBN0 382 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 INPP5DQ92835 1189 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 CPNE1Q99829 537 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 SFMBT1Q9UHJ3 866 aa17.78■□□□□ 0.44
DDX28-201ENST00000332395 MSI1O43347 362 aaKnown RBP17.77■□□□□ 0.44
DDX28-201ENST00000332395 GLRA3O75311 464 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 PAGE1O75459 146 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 USP1O94782 785 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 CCR1P32246 355 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 PDE1BQ01064 536 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 ZNF33AQ06730 810 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 SLC39A12Q504Y0 691 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 CLLU1OSQ5K130 101 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 SCD5Q86SK9 330 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 CASP10Q92851 521 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 SLC7A6OSQ96CW6 309 aaPredicted RBP17.77■□□□□ 0.44
DDX28-201ENST00000332395 TBC1D31Q96DN5 1066 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 RSRC1Q96IZ7 334 aaKnown RBP17.77■□□□□ 0.44
DDX28-201ENST00000332395 RAB3IPQ96QF0 476 aaPredicted RBP17.77■□□□□ 0.44
DDX28-201ENST00000332395 SAR1AQ9NR31 198 aa17.77■□□□□ 0.44
DDX28-201ENST00000332395 ZCWPW2A0A1B0GU75 182 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 DFFAO00273 331 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 EOMESO95936 686 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 RPSAP08865 295 aaKnown RBP17.77■□□□□ 0.43
DDX28-201ENST00000332395 MYL2P10916 166 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 SERPINB3P29508 390 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 RASSF2P50749 326 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 IRX4P78413 519 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 OCRLQ01968 901 aa17.77■□□□□ 0.43
DDX28-201ENST00000332395 DSC1Q08554 894 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms