RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PCYOX1Q9UHG3 505 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 HS3ST4Q9Y661 456 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 APOC4-APOC2K7ER74 178 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 LINC01565O15544 149 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CLDN11O75508 207 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 APOC2P02655 101 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 NUDT17P0C025 328 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CEBPBP17676 345 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MX2P20592 715 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TACR2P21452 398 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CORO1AP31146 461 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PTGIRP43119 386 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 LIG3P49916 1009 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 NDST2P52849 883 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PLTPP55058 493 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CDH4P55283 916 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 YBEYP58557 167 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TPI1P60174 286 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SLC12A1Q13621 1099 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CCNG2Q16589 344 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MPPE1Q53F39 396 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MFSD7Q6UXD7 560 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SETD3Q86TU7 594 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ZDHHC14Q8IZN3 488 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ADAM32Q8TC27 787 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 HSPH1Q92598 858 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 USP13Q92995 863 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 HAUS1Q96CS2 278 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TCEAL4Q96EI5 215 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 LRCH3Q96II8 777 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CSPG4P5Q96PW8 444 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ZYG11BQ9C0D3 744 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 UBE2ZQ9H832 354 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TMEM248Q9NWD8 314 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 AGO1Q9UL18 857 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 NOVA2Q9UNW9 492 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SNX24Q9Y343 169 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TRIOBPQ9H2D6 2365 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 CFAP69A5D8W1 941 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 E9PAM4 449 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 NDC80O14777 642 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 APOL1O14791 398 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MTSS1O43312 755 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MSI1O43347 362 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 FNTAP49354 379 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MAGOHP61326 146 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 AUHQ13825 339 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ZFYVE27Q5T4F4 411 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 DENND2CQ68D51 928 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 C4orf22Q6V702 233 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SYDE1Q6ZW31 735 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 UMODL1-AS1Q8N2C9 162 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 C12orf76Q8N812 135 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 ZSCAN18Q8TBC5 510 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 FBXO25Q8TCJ0 367 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SH3RF2Q8TEC5 729 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 FGF13Q92913 245 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 SLCO2A1Q92959 643 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 HLA-CQ95604 372 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 EPB41L4BQ9H329 900 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PABPC3Q9H361 631 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 LRRC19Q9H756 370 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PPANQ9NQ55 473 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 TRPV5Q9NQA5 729 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 GRHL1Q9NZI5 618 aa9.76□□□□□ -0.85
C11orf54-201ENST00000331239 MTRF1LQ9UGC7 380 aaKnown RBP9.76□□□□□ -0.85
C11orf54-201ENST00000331239 PRRC2BQ5JSZ5 2229 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 DCLK1O15075 740 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CYBBP04839 570 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 LAMP2P13473 410 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 FOSL2P15408 326 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TCF4P15884 667 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CDR1P51861 262 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 PMS2P54278 862 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 FCHO2Q0JRZ9 810 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CBX2Q14781 532 aaPredicted RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 PREPLQ4J6C6 727 aaPredicted RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 PIK3R6Q5UE93 754 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 AFMIDQ63HM1 303 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TXNRD3NBQ6F5E7 133 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TTC27Q6P3X3 843 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CCDC137Q6PK04 289 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CCDC50Q8IVM0 306 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ARID3BQ8IVW6 561 aaPredicted RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 MFSD6LQ8IWD5 586 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 DEFB123Q8N688 67 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 RTL3Q8N8U3 475 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 NKD2Q969F2 451 aaPredicted RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 TLCD1Q96CP7 247 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CNOT10Q9H9A5 744 aaKnown RBP9.75□□□□□ -0.85
C11orf54-201ENST00000331239 ZFP14Q9HCL3 533 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CFAP97Q9P2B7 532 aa9.75□□□□□ -0.85
C11orf54-201ENST00000331239 CDH23Q9H251 3354 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms