RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 MYH8P13535 1937 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TBX3O15119 743 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TPBGLP0DKB5 382 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ITGALP20701 1170 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KCTD19Q17RG1 926 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CAVIN3Q969G5 261 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 COLGALT1Q8NBJ5 622 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DMGDHQ9UI17 866 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TMCO1Q9UM00 188 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 AK5Q9Y6K8 562 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 GLP2RO95838 553 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ZNF844Q08AG5 666 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SLC26A11Q86WA9 606 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ZNF655Q8N720 491 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SMYD1Q8NB12 490 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ADHFE1Q8IWW8 467 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OR6J1Q8NGC5 347 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 WDR41Q9HAD4 459 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 INTS10Q9NVR2 710 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SCAMP1O15126 338 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ADSSP30520 456 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 GCLCP48506 637 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CLCN2P51788 898 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RAB25P57735 213 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TRMT2AQ8IZ69 625 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PNPT1Q8TCS8 783 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SENP6Q9GZR1 1112 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 F5H6K3 240 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KLRC3Q07444 240 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DNAJB14Q8TBM8 379 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KBTBD7Q8WVZ9 684 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OSGEPL1Q9H4B0 414 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KCNH1O95259 989 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ERVK-10P10266 1014 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CNTFP26441 200 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 MSX2P35548 267 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RAPSNQ13702 412 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FRMD7Q6ZUT3 714 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PAGE2Q7Z2X7 111 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NET1Q7Z628 596 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 APBA2Q99767 749 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TDRD1Q9BXT4 1180 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ANAPC2Q9UJX6 822 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PTPRTO14522 1441 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OR14I1A6ND48 311 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CD3EAPO15446 510 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NPTXRO95502 500 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CCR4P51679 360 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CDH18Q13634 790 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 HAVCR1Q96D42 359 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 MAPRE3Q9UPY8 281 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TMEM114B3SHH9 223 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ANXA6P08133 673 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ACADSBP45954 432 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 GEMP55040 296 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OXCT1P55809 520 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CAMK1Q14012 370 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 POP1Q99575 1024 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NADKO95544 446 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DLG1Q12959 904 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TOMM20Q15388 145 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KYAT1Q16773 422 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PHACTR4Q8IZ21 702 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 UCMAQ8WVF2 138 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SLC6A15Q9H2J7 730 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SIN3BO75182 1162 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OR7A10O76100 309 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ITGA4P13612 1032 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CRATP43155 626 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 MILR1Q7Z6M3 343 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 SPAG16Q8N0X2 631 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TRPV3Q8NET8 790 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 VPS35Q96QK1 796 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms