RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 UBXN4Q92575 508 aa15.68■□□□□ 0.1
PRPF3-201ENST00000324862 PNKPQ96T60 521 aa15.68■□□□□ 0.1
PRPF3-201ENST00000324862 USP29Q9HBJ7 922 aa15.68■□□□□ 0.1
PRPF3-201ENST00000324862 PCYOX1Q9UHG3 505 aa15.68■□□□□ 0.1
PRPF3-201ENST00000324862 DOCK8Q8NF50 2099 aa15.68■□□□□ 0.1
PRPF3-201ENST00000324862 MUC3AQ02505 3323 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 KCNN4O15554 427 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 ARSAP15289 507 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 GLDCP23378 1020 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 HOXD9P28356 352 aaPredicted RBP15.67■□□□□ 0.1
PRPF3-201ENST00000324862 PAPOLAP51003 745 aaKnown RBP15.67■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF135P52742 658 aaPredicted RBP15.67■□□□□ 0.1
PRPF3-201ENST00000324862 RABGAP1LQ5R372 815 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 LY6G5CQ5SRR4 150 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 CXorf57Q6NSI4 855 aaKnown RBP15.67■□□□□ 0.1
PRPF3-201ENST00000324862 VITQ6UXI7 678 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 OR7D4Q8NG98 312 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 RSAD2Q8WXG1 361 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 SUSD6Q92537 303 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF419Q96HQ0 510 aaPredicted RBP15.67■□□□□ 0.1
PRPF3-201ENST00000324862 EBF3Q9H4W6 596 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 SOBPA7XYQ1 873 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 WASH4PA8MWX3 477 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 NEDD8-MDP1E9PL57 170 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 NR2C2P49116 596 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 FNTAP49354 379 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 ANO4Q32M45 955 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 FYB2Q5VWT5 728 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 NAT16Q8N8M0 369 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 ATL2Q8NHH9 583 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 BPIFB1Q8TDL5 484 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 PRDM6Q9NQX0 595 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 TMEM51Q9NW97 253 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 SEPT10Q9P0V9 454 aa15.67■□□□□ 0.1
PRPF3-201ENST00000324862 HELZP42694 1942 aaKnown RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 A0A1B0GVM2 712 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 TCAF2A6NFQ2 919 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 J3KR12 359 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 HEXIM1O94992 359 aaKnown RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 LATS1O95835 1130 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 MZF1P28698 734 aaPredicted RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 CHKAP35790 457 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 GARSP41250 739 aaKnown RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 CDH4P55283 916 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 GALNT2Q10471 571 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 SYCP2LQ5T4T6 812 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 AFMIDQ63HM1 303 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 RHBDF2Q6PJF5 856 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF354CQ86Y25 554 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 ALLCQ8N6M5 410 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 DPH5Q9H2P9 285 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 DUS2Q9NX74 493 aaKnown RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 MYOFQ9NZM1 2061 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 RASA4BC9J798 803 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 H0Y626 953 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 RASA4O43374 803 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 RAMP2O60895 175 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 ECEL1O95672 775 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 ITGAVP06756 1048 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 HTR7P34969 479 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 SERPINB6P35237 376 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 MTHFRP42898 656 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 GUCY2DQ02846 1103 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 SLC45A4Q5BKX6 768 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 DRICH1Q6PGQ1 229 aaPredicted RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 UMODL1-AS1Q8N2C9 162 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 CCDC110Q8TBZ0 833 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 USP33Q8TEY7 942 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
PRPF3-201ENST00000324862 QKIQ96PU8 341 aaKnown RBP eCLIP15.66■□□□□ 0.15e-12■■■■■ 33.6
PRPF3-201ENST00000324862 ZFP14Q9HCL3 533 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 A0A0C4DFX4 3053 aa15.66■□□□□ 0.1
PRPF3-201ENST00000324862 WEE1P30291 646 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 TFF2Q03403 129 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 MTA1Q13330 715 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 POLD3Q15054 466 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 PPP1R7Q15435 360 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 NAIF1Q69YI7 327 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 MFN1Q8IWA4 741 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 GSPT2Q8IYD1 628 aaKnown RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 CPXM2Q8N436 756 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 HJURPQ8NCD3 748 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 IRF7Q92985 503 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 BBS2Q9BXC9 721 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 SPHK2Q9NRA0 654 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 HOMER3Q9NSC5 361 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 ZMYM5Q9UJ78 669 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF510Q9Y2H8 683 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 DOCK4Q8N1I0 1966 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 UQCRHLA0A096LP55 91 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 CTIFO43310 598 aaKnown RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 MAFKO60675 156 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 CLDN11O75508 207 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 LUC7L3O95232 432 aaKnown RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 UQCRHP07919 91 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms