RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 JMJD4Q9H9V9 463 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 CALCAP01258 141 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ITGALP20701 1170 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ACOX1Q15067 660 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 FNDC5Q8NAU1 212 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ANKS1AQ92625 1134 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 GMCL1Q96IK5 515 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 FBXO28Q9NVF7 368 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ZNF446Q9NWS9 450 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 RNASEH1O60930 286 aaKnown RBP8.04□□□□□ -1.12
CIITA-201ENST00000324288 IFNA14P01570 189 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 SLCO6A1Q86UG4 719 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 TBC1D16Q8TBP0 767 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 MTG1Q9BT17 334 aaPredicted RBP8.04□□□□□ -1.12
CIITA-201ENST00000324288 BDH2Q9BUT1 245 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 AGPAT3Q9NRZ7 376 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ZNF70Q9UC06 446 aaPredicted RBP8.04□□□□□ -1.12
CIITA-201ENST00000324288 BANF1O75531 89 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ACADMP11310 421 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 GMPSP49915 693 aaPredicted RBP8.04□□□□□ -1.12
CIITA-201ENST00000324288 CTXN3Q4LDR2 81 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 SAMD7Q7Z3H4 446 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 CCDC185Q8N715 623 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 VPS45Q9NRW7 570 aa8.04□□□□□ -1.12
CIITA-201ENST00000324288 AP5Z1O43299 807 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 RIPK2O43353 540 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 GRIA3P42263 894 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TAF6P49848 677 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ADIGQ0VDE8 80 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 C5orf22Q49AR2 442 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 BROXQ5VW32 411 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 DET1Q7L5Y6 550 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 SLFN11Q7Z7L1 901 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NINJ2Q9NZG7 142 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 LNPEPQ9UIQ6 1025 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 UBDO15205 165 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 FDFT1P37268 417 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 CWF19L1Q69YN2 538 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 SLC9A7Q96T83 725 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 RSL24D1Q9UHA3 163 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 TIMM13Q9Y5L4 95 aaPredicted RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 ACAT1P24752 427 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 C8orf59Q8N0T1 100 aaPredicted RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 PMM1Q92871 262 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PPP1R2P1Q96PQ5 205 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ABCB9Q9NP78 766 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 VANGL2Q9ULK5 521 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PIAS1O75925 651 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 GLP2RO95838 553 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NCK1P16333 377 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 RRM1P23921 792 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 AZGP1P25311 298 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 ALDH4A1P30038 563 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 EIF2S3P41091 472 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 ITGA1P56199 1179 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 AP5B1Q2VPB7 878 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 MTX3Q5HYI7 312 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 C6orf52Q5T4I8 152 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 GMFGO60234 142 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 USP12O75317 370 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 CPT1AP50416 773 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 MGAT5Q09328 741 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PRMT9Q6P2P2 845 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PROX1Q92786 737 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ZFYVE28Q9HCC9 887 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 RGS18Q9NS28 235 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 RHOAP61586 193 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 FNBP1LQ5T0N5 605 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 KLHL23Q8NBE8 558 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 CBWD1Q9BRT8 395 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PIGUQ9H490 435 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 PRMT7Q9NVM4 692 aaPredicted RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 CCDC167Q9P0B6 97 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 POMCP01189 267 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TMEM132BQ14DG7 1078 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TFDP3Q5H9I0 405 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ZC3H7AQ8IWR0 971 aaKnown RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 GRIN3AQ8TCU5 1115 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TAAR1Q96RJ0 339 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NDNQ99608 321 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TNKS2Q9H2K2 1166 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 UCKL1Q9NWZ5 548 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NKIRAS2Q9NYR9 191 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 GMPPBQ9Y5P6 360 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 ZNF879B4DU55 563 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NADKO95544 446 aaPredicted RBP8.03□□□□□ -1.12
CIITA-201ENST00000324288 FUT4P22083 530 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 TMC3Q7Z5M5 1100 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 MBOAT7Q96N66 472 aa8.03□□□□□ -1.12
CIITA-201ENST00000324288 NUDT12Q9BQG2 462 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms