RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 AKAP5P24588 427 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SSTR1P30872 391 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SNAP25P60880 206 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PLIN5Q00G26 463 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RAD51Q06609 339 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 GRB10Q13322 594 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MARCH10Q8NA82 808 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SEPHS2Q99611 448 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 MRPL39Q9NYK5 338 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TAS2R1Q9NYW7 299 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 C3orf18Q9UK00 162 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 NDUFAF1Q9Y375 327 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PCDHGA10Q9Y5H3 936 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SCN7AQ01118 1682 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 KBTBD13C9JR72 458 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 SLC22A2O15244 555 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 GTF2IP78347 998 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 POU4F1Q01851 419 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TROAPQ12815 778 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TSTA3Q13630 321 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 BICRALQ6AI39 1079 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RFWD3Q6PCD5 774 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 C11orf88Q6PI97 169 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RAB43Q86YS6 212 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 BBS7Q8IWZ6 715 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 DSELQ8IZU8 1212 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 TCAIMQ8N3R3 496 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 ATG16L2Q8NAA4 619 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 PLEKHA8Q96JA3 519 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 NLRP4Q96MN2 994 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RUSC1Q9BVN2 902 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJC28Q9NX36 388 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 GNEQ9Y223 722 aaKnown RBP7.19□□□□□ -1.26
SMC1A-201ENST00000322213 USP20Q9Y2K6 914 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 RPTORQ8N122 1335 aa7.19□□□□□ -1.26
SMC1A-201ENST00000322213 NACAE9PAV3 2078 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CRABP2P29373 138 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PTGER2P43116 358 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NFYCQ13952 458 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TAF5Q15542 800 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SH3RF1Q7Z6J0 888 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SEPT12Q8IYM1 358 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC20Q8TCA0 184 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ACAT2Q9BWD1 397 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 AS3MTQ9HBK9 375 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 FARP2O94887 1054 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ABL1P00519 1130 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CYP1A2P05177 515 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SOX11P35716 441 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PHKA2P46019 1235 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ADGRE1Q14246 886 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NAPEPLDQ6IQ20 393 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RASSF6Q6ZTQ3 369 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ACTL9Q8TC94 416 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NSMCE2Q96MF7 247 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PPP1R10Q96QC0 940 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CGREF1Q99674 301 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 OR2B2Q9GZK3 357 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NOL11Q9H8H0 719 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ARL8BQ9NVJ2 186 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RNF112Q9ULX5 631 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SNX7Q9UNH6 387 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PEX11AO75192 247 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SGPL1O95470 568 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 FYNP06241 537 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 AMPD1P23109 780 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RPL10AP62906 217 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TRAP1Q12931 704 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 EPHA7Q15375 998 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 C6orf89Q6UWU4 347 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ASB2Q96Q27 587 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NMUR2Q9GZQ4 415 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 C2orf40Q9H1Z8 148 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SMARCAD1Q9H4L7 1026 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CD274Q9NZQ7 290 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 DNPEPQ9ULA0 475 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 DGKBQ9Y6T7 804 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 GPR75-ASB3A0A0A6YYF3 556 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PSMD11O00231 422 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TSPAN4O14817 238 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TBX10O75333 385 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RARBP10826 455 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 MYL12AP19105 171 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SLC9A3P48764 834 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 EFNA5P52803 228 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ACTR3P61158 418 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CHSY1Q86X52 802 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ABCA7Q8IZY2 2146 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TMCO6Q96DC7 493 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 HSPBAP1Q96EW2 488 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TINF2Q9BSI4 451 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 BCS1LQ9Y276 419 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ASB3Q9Y575 518 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TNFRSF21O75509 655 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 OXSR1O95747 527 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF682O95780 498 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 OSTNP61366 133 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SBK1Q52WX2 424 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms