RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 CMC1Q7Z7K0 106 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 ACTRT2Q8TDY3 377 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 KHSRPQ92945 711 aaKnown RBP eCLIP16.4■□□□□ 0.22
CRAT-201ENST00000318080 MARK4Q96L34 752 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PTPRHQ9HD43 1115 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PFDN4Q9NQP4 134 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 GMEB1Q9Y692 573 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 GPR25O00155 361 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 NEMP1O14524 444 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 GABBR2O75899 941 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 FBXO21O94952 628 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PGK2P07205 417 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PTPN1P18031 435 aaKnown RBP16.4■□□□□ 0.22
CRAT-201ENST00000318080 XRCC1P18887 633 aaPredicted RBP16.4■□□□□ 0.22
CRAT-201ENST00000318080 MAGEA6P43360 314 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 HDAC4P56524 1084 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 C16orf72Q14CZ0 275 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 LY6KQ17RY6 165 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 ATF7IP2Q5U623 682 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 ITPRIPL1Q6GPH6 555 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 PKP2Q99959 881 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 ACAD9Q9H845 621 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
CRAT-201ENST00000318080 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
CRAT-201ENST00000318080 NOP56O00567 594 aaKnown RBP16.39■□□□□ 0.21
CRAT-201ENST00000318080 B4GALT4O60513 344 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 COL6A2P12110 1019 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CDH2P19022 906 aaPredicted RBP16.39■□□□□ 0.21
CRAT-201ENST00000318080 CYP2F1P24903 491 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 NDST1P52848 882 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 PGGT1BP53609 377 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CDK18Q07002 472 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 LPIN1Q14693 890 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 SLC9B1Q4ZJI4 515 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 MARVELD2Q8N4S9 558 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 RAB3IL1Q8TBN0 382 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CDT1Q9H211 546 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 ARMC7Q9H6L4 198 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 NRBP2Q9NSY0 501 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 PDHXO00330 501 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CSPG5O95196 566 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 KLHL2O95198 593 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 STAMBPO95630 424 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 CCR10P46092 362 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 GJA8P48165 433 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 THOP1P52888 689 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 NAA20P61599 178 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 MS4A2Q01362 244 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 NAPRTQ6XQN6 538 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 PLD6Q8N2A8 252 aaKnown RBP16.39■□□□□ 0.21
CRAT-201ENST00000318080 MCUQ8NE86 351 aa16.39■□□□□ 0.21
CRAT-201ENST00000318080 ERVK-10P10266 1014 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 PROZP22891 400 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 MGAT1P26572 445 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 NUDT2P50583 147 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 EFNA5P52803 228 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 ZNF781Q8N8C0 355 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 CLEC4CQ8WTT0 213 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 LRGUKQ96M69 825 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 LGMNQ99538 433 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 SUN2Q9UH99 717 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 ITGA11Q9UKX5 1188 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 DMTF1Q9Y222 760 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 EPHA3P29320 983 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 MLH1P40692 756 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 STILQ15468 1287 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 TIFABQ6ZNK6 161 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 LENG8Q96PV6 779 aaPredicted RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 CDRT15Q96T59 188 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 MTMR10Q9NXD2 777 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 SPATA7Q9P0W8 599 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 LCTP09848 1927 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 XPOTO43592 962 aaKnown RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 SERPINE1P05121 402 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 COX4I1P13073 169 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 P4HA1P13674 534 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 TGM2P21980 687 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 ZBTB8BQ8NAP8 495 aaPredicted RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 SLC35B4Q969S0 331 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 OR52B2Q96RD2 323 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 EPB41L1Q9H4G0 881 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 WDR55Q9H6Y2 383 aaPredicted RBP16.38■□□□□ 0.21
CRAT-201ENST00000318080 CAAP1Q9H8G2 361 aa16.38■□□□□ 0.21
CRAT-201ENST00000318080 COG4Q9H9E3 785 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms