RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FAM47BQ8NA70 645 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CHPT1Q8WUD6 406 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HTR3CQ8WXA8 447 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TFAP2BQ92481 460 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 QKIQ96PU8 341 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ACE2Q9BYF1 805 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C20orf27Q9GZN8 174 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TSPYL2Q9H2G4 693 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 OXSMQ9NWU1 459 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SEPT9Q9UHD8 586 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 EMCNQ9ULC0 261 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ACOT8O14734 319 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 B4GALT4O60513 344 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RNASEH2AO75792 299 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SPATA31D3P0C874 917 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CDH3P22223 829 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PTPN9P43378 593 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TFAMQ00059 246 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 FAM196AQ6ZSG2 479 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SPATA31D4Q6ZUB0 917 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 KRT27Q7Z3Y8 459 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 DHFR2Q86XF0 187 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TTC30BQ8N4P2 665 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 IL31RAQ8NI17 732 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RXFP2Q8WXD0 754 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SEPT8Q92599 483 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HSPBAP1Q96EW2 488 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CERS2Q96G23 380 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 NGRNQ9NPE2 291 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SPAG4Q9NPE6 437 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PFDN4Q9NQP4 134 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ADA2Q9NZK5 511 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 FBXO40Q9UH90 709 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 FUOMA2VDF0 154 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SOBPA7XYQ1 873 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MAP4P27816 1152 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 GJA8P48165 433 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CACNB3P54284 484 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TMBIM6P55061 237 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TGFB2P61812 414 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 GSTM4Q03013 218 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MTMR2Q13614 643 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PPP2R5DQ14738 602 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 UGCGQ16739 394 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SWSAP1Q6NVH7 229 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MAMDC4Q6UXC1 1216 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ERMP1Q7Z2K6 904 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SIX6OS1Q8N1H7 587 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NLGN1Q8N2Q7 840 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 WDTC1Q8N5D0 677 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RAB2BQ8WUD1 216 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 JDP2Q8WYK2 163 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF778Q96MU6 729 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RHOBTB2Q9BYZ6 727 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PARVBQ9HBI1 364 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 C20orf96Q9NUD7 363 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 OLAHQ9NV23 265 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM216Q9P0N5 145 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TOGARAM1Q9Y4F4 1720 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM247A6NEH6 219 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 HTRA2O43464 458 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CNOT3O75175 753 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LGR5O75473 907 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SRP72O76094 671 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MAGEA12P43365 314 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SLC5A3P53794 718 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LSM12Q3MHD2 195 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CYP4A22Q5TCH4 519 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ITPRIPL1Q6GPH6 555 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RSBN1LQ6PCB5 846 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TRMT1LQ7Z2T5 733 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PQLC3Q8N755 202 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TFAP2CQ92754 450 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MMP19Q99542 508 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CGREF1Q99674 301 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PKP2Q99959 881 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SLC38A10Q9HBR0 1119 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SNX15Q9NRS6 342 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ARMC1Q9NVT9 282 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ACOT9Q9Y305 439 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CHD4Q14839 1912 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 BBIP1A8MTZ0 92 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 M0QYV0 167 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DACT2Q5SW24 774 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ABRAXAS1Q6UWZ7 409 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 FKBP9P1Q75LS8 142 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CLEC14AQ86T13 490 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PCDH19Q8TAB3 1148 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 POP5Q969H6 163 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 C12orf43Q96C57 262 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ROPN1LQ96C74 230 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 GGA3Q9NZ52 723 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF232Q9UNY5 417 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SPDYE2BA6NHP3 402 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms