RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 CSDE1O75534 798 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 FARP2O94887 1054 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 EPHA3P29320 983 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PSMD4P55036 377 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 CNPY1Q3B7I2 92 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 HMBOX1Q6NT76 420 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GALNTL5Q7Z4T8 443 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SGMS1Q86VZ5 419 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ADHFE1Q8IWW8 467 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ZNF560Q96MR9 790 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 KCNK4Q9NYG8 393 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PCDHB8Q9UN66 801 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ACOT9Q9Y305 439 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 RARBP10826 455 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ARL4DP49703 201 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 QPCTQ16769 361 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GNPTGQ9UJJ9 305 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GSTK1Q9Y2Q3 226 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 CUL2Q13617 745 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 UGT3A1Q6NUS8 523 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CIR1Q86X95 450 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 CNPY3Q9BT09 278 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 STARD7Q9NQZ5 370 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GDF3Q9NR23 364 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 M0QYT0 321 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SGTAO43765 313 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 RBP5P82980 135 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CAMK2GQ13555 558 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 KCNA10Q16322 511 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 PFKFB4Q16877 469 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 ZNF470Q6ECI4 717 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 OFCC1Q8IZS5 231 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GALNT6Q8NCL4 622 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CIB1Q99828 191 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 DPY30Q9C005 99 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 CLN6Q9NWW5 311 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 POLR1DQ9Y2S0 133 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TSPAN8P19075 237 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TUBA3EQ6PEY2 450 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 YTHDF3Q7Z739 585 aaKnown RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 PHC2Q8IXK0 858 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 CRYL1Q9Y2S2 319 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 MYO5BQ9ULV0 1848 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 GSG1L2A8MUP6 293 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 RAPSNQ13702 412 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 SLITRK2Q9H156 845 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 RABL2AQ9UBK7 228 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 UMODL1Q5DID0 1318 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 STARD3Q14849 445 aa8.88□□□□□ -0.99
USF3-201ENST00000316407 INO80DQ53TQ3 878 aaPredicted RBP8.88□□□□□ -0.99
USF3-201ENST00000316407 FOXO6A8MYZ6 492 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SNAP91O60641 907 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PPP2R1BP30154 601 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.87□□□□□ -0.99
USF3-201ENST00000316407 ZNF285Q96NJ3 590 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SPAG4Q9NPE6 437 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SEMA4BQ9NPR2 832 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 PRR12Q9ULL5 1215 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 ATF6P18850 670 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 DRD4P21917 467 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 HPCAL1P37235 193 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SLC45A4Q5BKX6 768 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 ACAD10Q6JQN1 1059 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PRR5LQ6MZQ0 368 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PACS1Q6VY07 963 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 C12orf56Q8IXR9 622 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 IPCEF1Q8WWN9 437 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 CATSPERBQ9H7T0 1116 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SLCO1B3Q9NPD5 702 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 IFRD1O00458 451 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 VAPBO95292 243 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 MYBL2P10244 700 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 GUCA1AP43080 201 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 MRNIPQ6NTE8 343 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 FOXP4Q8IVH2 680 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 ACAT2Q9BWD1 397 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 WDR35Q9P2L0 1181 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PRAMEF33A0A0G2JMD5 474 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 A0A0X1KG70 313 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PSMD12O00232 456 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 DPYSL4O14531 572 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 SLC37A4O43826 429 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 GAS2O43903 313 aaKnown RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 PRAMEF10O60809 474 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 KCNH1O95259 989 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 KCNMB4Q86W47 210 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 RSPH9Q9H1X1 276 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 CEP152O94986 1710 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
USF3-201ENST00000316407 BMP10O95393 424 aa8.87□□□□□ -0.99
USF3-201ENST00000316407 CTDNEP1O95476 244 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms