RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 APBA2Q99767 749 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 LRRC40Q9H9A6 602 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PADI3Q9ULW8 664 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 G3BP2Q9UN86 482 aaKnown RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ITGB1P05556 798 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 NCF2P19878 526 aaPredicted RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 AVPR1AP37288 418 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GLRBP48167 497 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 C7orf26Q96N11 449 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 SNX15Q9NRS6 342 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 TMLHEQ9NVH6 421 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 KCNK4Q9NYG8 393 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 SLC39A10Q9ULF5 831 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PLIN3O60664 434 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 MT-CYBP00156 380 aaPredicted RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GRIK1P39086 918 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 NIPAL4Q0D2K0 466 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 TRIM32Q13049 653 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 POU6F1Q14863 301 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 RCN1Q15293 331 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PLD6Q8N2A8 252 aaKnown RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ADAM2Q99965 735 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 THAP1Q9NVV9 213 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GTF2IRD1Q9UHL9 959 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 EMCNQ9ULC0 261 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 KRT36O76013 467 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ODC1P11926 461 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 IRF9Q00978 393 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 HSF5Q4G112 596 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 TEX44Q53QW1 395 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 TMEM86AQ8N2M4 240 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 PTCD3Q96EY7 689 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CDH9Q9ULB4 789 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 LOC100653049A0A140TA62 436 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 PMPCBO75439 489 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 KRT34O76011 436 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 AP2A1O95782 977 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 MX2P20592 715 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CNTFP26441 200 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CD68P34810 354 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 SERPINB6P35237 376 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 THOC5Q13769 683 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 FSTL4Q6MZW2 842 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 KYAT3Q6YP21 454 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 SLC25A41Q8N5S1 370 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CFAP61Q8NHU2 1237 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 DQX1Q8TE96 717 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 WDR60Q8WVS4 1066 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 NAT9Q9BTE0 207 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 MAN1C1Q9NR34 630 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 IGSF9Q9P2J2 1179 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF638Q14966 1978 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 A0A096LPK6 155 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 KLF11O14901 512 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 PHGDHO43175 533 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 MGEA5O60502 916 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 RALBP11234 206 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 USP4Q13107 963 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ANKRD20A4Q4UJ75 823 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 BTBD8Q5XKL5 378 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 STEAP4Q687X5 459 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 OVOS1Q6IE37 1185 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 RBM15BQ8NDT2 890 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ACVR1CQ8NER5 493 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 PIWIL2Q8TC59 973 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF570Q96NI8 536 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 MLPHQ9BV36 600 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 OXCT2Q9BYC2 517 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
PTPN2-201ENST00000309660 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 APOBEC2Q9Y235 224 aaKnown RBP11.8□□□□□ -0.52
PTPN2-201ENST00000309660 TTC3P53804 2025 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SPECC1L-ADORA2AF8WAN1 911 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ALDH1A2O94788 518 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 HSPA4LO95757 839 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 TPBGLP0DKB5 382 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 NMBRP28336 390 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 MPP3Q13368 585 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SEPT6Q14141 434 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PCLAFQ15004 111 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PCSK7Q16549 785 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 LRRTM3Q86VH5 581 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 CCNJLQ8IV13 435 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SPATA6LQ8N4H0 392 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 OR10T2Q8NGX3 314 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SCYL1Q96KG9 808 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 TUBB6Q9BUF5 446 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms