RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NAPRTQ6XQN6 538 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 OR52K1Q8NGK4 314 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CDT1Q9H211 546 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 GTSE1Q9NYZ3 720 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 BARX2Q9UMQ3 279 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 TBC1D30Q9Y2I9 924 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 TDRKHQ9Y2W6 561 aaKnown RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 HDAC3O15379 428 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 SEC24DO94855 1032 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 IL18RAPO95256 599 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 LTFP02788 710 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CCDC166P0CW27 439 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 ADORA2BP29275 332 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 SNX16P57768 344 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CDKL1Q00532 357 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 FSTL1Q12841 308 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 LPIN1Q14693 890 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CYP2R1Q6VVX0 501 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 SETD3Q86TU7 594 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 RP9Q8TA86 221 aaKnown RBP11.39□□□□□ -0.59
PTPN7-201ENST00000309017 ATP6V1E2Q96A05 226 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 CPNE1Q99829 537 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 MORF4L1Q9UBU8 362 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 MID2Q9UJV3 735 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
PTPN7-201ENST00000309017 FBXO21O94952 628 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 RPL14P50914 215 aaKnown RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 MS4A2Q01362 244 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SLC6A3Q01959 620 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 C16orf72Q14CZ0 275 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 TMEM132BQ14DG7 1078 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 METTL21CQ5VZV1 264 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 MYO1HQ8N1T3 1032 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PYROXD2Q8N2H3 581 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SEPT1Q8WYJ6 367 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 AGAP2Q99490 1192 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 DTLQ9NZJ0 730 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PAPSS1O43252 624 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 C2P06681 752 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PPARGP37231 505 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 GRIA4P48058 902 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 CEACAM7Q14002 265 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 TMEM132DQ14C87 1099 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 ADRM1Q16186 407 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PPP1R26Q5T8A7 1209 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SGF29Q96ES7 293 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 QKIQ96PU8 341 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 CSPG4P5Q96PW8 444 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 BCO2Q9BYV7 579 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 GINS2Q9Y248 185 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 A0A1B0GTW7 788 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 TK2O00142 265 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 ACKR2O00590 384 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PHGDHO43175 533 aaKnown RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SUPT3HO75486 399 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 VAPBO95292 243 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SLC5A2P31639 672 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PHKA2P46019 1235 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 NR2C2P49116 596 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 NIPAL4Q0D2K0 466 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 USP10Q14694 798 aaKnown RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 AMHR2Q16671 573 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 FSTL4Q6MZW2 842 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 URGCPQ8TCY9 931 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 DLG3Q92796 817 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 CIDEBQ9UHD4 219 aa11.38□□□□□ -0.59
PTPN7-201ENST00000309017 HEMK1Q9Y5R4 338 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-201ENST00000309017 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 LTBP1Q14766 1721 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 AP1G1O43747 822 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 GPC4O75487 556 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 MAGEA3P43357 314 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 MAGEA6P43360 314 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 PGGT1BP53609 377 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 BACE1P56817 501 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 MPP3Q13368 585 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 ARL13AQ5H913 290 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-201ENST00000309017 PRAMEF18Q5VWM3 479 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 LRRC8EQ6NSJ5 796 aa11.37□□□□□ -0.59
PTPN7-201ENST00000309017 ZNF410Q86VK4 478 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms