RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 IFRD2Q12894 506 aaPredicted RBP16.96■□□□□ 0.31
SSH3-201ENST00000308127 C6orf52Q5T4I8 152 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 LRRC8BQ6P9F7 803 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 SPATA24Q86W54 205 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 RIOX2Q8IUF8 465 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 ZFAND2BQ8WV99 257 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 OMDQ99983 421 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 GATA5Q9BWX5 397 aaPredicted RBP16.96■□□□□ 0.31
SSH3-201ENST00000308127 ELP3Q9H9T3 547 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 TCF7L2Q9NQB0 619 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 IARS2Q9NSE4 1012 aaKnown RBP16.96■□□□□ 0.31
SSH3-201ENST00000308127 ARHGAP26Q9UNA1 814 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 ALDH1A2O94788 518 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 SYPL2Q5VXT5 272 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 HFE2Q6ZVN8 426 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 RPS27LQ71UM5 84 aaKnown RBP16.96■□□□□ 0.31
SSH3-201ENST00000308127 KDELC2Q7Z4H8 507 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 RAB3IL1Q8TBN0 382 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 USP33Q8TEY7 942 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 NAT14Q8WUY8 206 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 TMA16Q96EY4 203 aaKnown RBP16.96■□□□□ 0.31
SSH3-201ENST00000308127 DCUN1D1Q96GG9 259 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 FAM192AQ9GZU8 254 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 CDH19Q9H159 772 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 SMARCAD1Q9H4L7 1026 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 ASB7Q9H672 318 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 CITO14578 2027 aa16.96■□□□□ 0.31
SSH3-201ENST00000308127 G3V2L1 256 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 HBP1O60381 514 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 TSPAN1O60635 241 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 BEST1O76090 585 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 C2P06681 752 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 POLBP06746 335 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 TGFB3P10600 412 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 MX2P20592 715 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 GP5P40197 560 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 MS4A2Q01362 244 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 STEAP4Q687X5 459 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 AAGABQ6PD74 315 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 B4GALNT2Q8NHY0 566 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 MPP4Q96JB8 637 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 PYGLP06737 847 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 PIK3R1P27986 724 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 RANBP1P43487 201 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 PLPPR4Q7Z2D5 763 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 APLFQ8IW19 511 aaPredicted RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 RNF139Q8WU17 664 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 SEMA6AQ9H2E6 1030 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 TASP1Q9H6P5 420 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 SUDS3Q9H7L9 328 aaPredicted RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 ANLNQ9NQW6 1124 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 DNAJC28Q9NX36 388 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 SPTLC1O15269 473 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 DESP17661 470 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 FGFR3P22607 806 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 DPP6P42658 865 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 NUMBP49757 651 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 NAGLUP54802 743 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 CNGA3Q16281 694 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 EPGNQ6UW88 154 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 UGT2A3Q6UWM9 527 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 RBM44Q6ZP01 1051 aaKnown RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 OLFM3Q96PB7 478 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 NPAS2Q99743 824 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
SSH3-201ENST00000308127 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
SSH3-201ENST00000308127 M0QYT0 321 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 MT-CO1P00395 513 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 FDFT1P37268 417 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 CHN2P52757 468 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 MTTPP55157 894 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 FLOT2Q14254 428 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 PDK1Q15118 436 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 ANKRD20A4Q4UJ75 823 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 BHLHE22Q8NFJ8 381 aaPredicted RBP16.94■□□□□ 0.3
SSH3-201ENST00000308127 AFG1LQ8WV93 481 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 NXF3Q9H4D5 531 aaKnown RBP16.94■□□□□ 0.3
SSH3-201ENST00000308127 CDHR5Q9HBB8 845 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
SSH3-201ENST00000308127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSH3-201ENST00000308127 PIGNO95427 931 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 LGALS2P05162 132 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 HDCP19113 662 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 GRK2P25098 689 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
SSH3-201ENST00000308127 TNFAIP2Q03169 654 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 DEUP1Q05D60 604 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 DSELQ8IZU8 1212 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 LILRA2Q8N149 483 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 CCNYL1Q8N7R7 359 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms