RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 OXNAD1Q96HP4 312 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF350Q9GZX5 532 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 A0A075B6Q4 140 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 M0R036 132 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 NPTXRO95502 500 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 YY1P25490 414 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 OXCT1P55809 520 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ORC1Q13415 861 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 OR8H1Q8NGG4 311 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 GFM1Q96RP9 751 aaKnown RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 GPAT3Q53EU6 434 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF540Q8NDQ6 660 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 METTL18O95568 372 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 C6orf222P0C671 652 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 N4BP2L1Q5TBK1 243 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 PIH1D2Q8WWB5 315 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CDADC1Q9BWV3 514 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF208O43345 1280 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
TRIM56-201ENST00000306085 HLA-DRAP01903 254 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 COX7A2P14406 83 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ATF6P18850 670 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 NTSP30990 170 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 DOK6Q6PKX4 331 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ATCAYQ86WG3 371 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 ARMC10Q8N2F6 343 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 FBXO39Q8N4B4 442 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 CHCHD6Q9BRQ6 235 aa13.62□□□□□ -0.23
TRIM56-201ENST00000306085 MAST1Q9Y2H9 1570 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CNTFP26441 200 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PKNOX1P55347 436 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PDCD4Q53EL6 469 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SAMD4BQ5PRF9 694 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 BICRALQ6AI39 1079 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PIK3C3Q8NEB9 887 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TMEM159Q96B96 161 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PLA2G4CQ9UP65 541 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 BPNT1O95861 308 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 H2AFXP16104 143 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 GRK5P34947 590 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 OR2L3Q8NG85 312 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CBX4O00257 560 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SLC33A1O00400 549 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 NOA1Q8NC60 698 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PSMD9O00233 223 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PLIN3O60664 434 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TYMPP19971 482 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SCNN1BP51168 640 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 DHRS1Q96LJ7 313 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 HPF1Q9NWY4 346 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CKBP12277 381 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 ATP4AP20648 1035 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MAGP20916 626 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 NEK3P51956 506 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 LRRC20Q8TCA0 184 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PHF10Q8WUB8 498 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SLC12A4Q9UP95 1085 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 C15orf41Q9Y2V0 281 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 IFI30P13284 250 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 ITIH1P19827 911 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MNDAP41218 407 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MAZP56270 477 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 S100A12P80511 92 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 SGCGQ13326 291 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MARK4Q96L34 752 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PABPC3Q9H361 631 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 LRRC40Q9H9A6 602 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 ACOT9Q9Y305 439 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 EYA4O95677 639 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MAPK7Q13164 816 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 FAAH2Q6GMR7 532 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TTYH1Q9H313 450 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF221Q9UK13 617 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 DRG1Q9Y295 367 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 HBS1LQ9Y450 684 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TOP3BO95985 862 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MPOP05164 745 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MCAMP43121 646 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms