RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 B3GNT6Q6ZMB0 384 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 CLVS1Q8IUQ0 354 aaPredicted RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 EBF4Q9BQW3 602 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 KIF17Q9P2E2 1029 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 CPB1P15086 417 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 C16orf72Q14CZ0 275 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 P2RY11Q96G91 374 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 POMKQ9H5K3 350 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 CDHR5Q9HBB8 845 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 MYRFQ9Y2G1 1151 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 NWD2Q9ULI1 1742 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 CHRM3P20309 590 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 OGDHQ02218 1023 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 SLC27A1Q6PCB7 646 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 PIGZQ86VD9 579 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 KCTD4Q8WVF5 259 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 WDR60Q8WVS4 1066 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
DDX54-201ENST00000306014 ZNF229Q9UJW7 825 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 BLOC1S6Q9UL45 172 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 ERI2A8K979 691 aaKnown RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 TBC1D4O60343 1298 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 TMCC1O94876 653 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 ARL2P36404 184 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 GRIK4Q16099 956 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 SGO1Q5FBB7 561 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 RHBDF2Q6PJF5 856 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 C1orf127Q8N9H9 656 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 PARK7Q99497 189 aaKnown RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 NT5MQ9NPB1 228 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 LNPEPQ9UIQ6 1025 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 TRHDEQ9UKU6 1024 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 FAM95CA0A1B0GW59 222 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 INPP4BO15327 924 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 KDM1AO60341 852 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 B4GALT4O60513 344 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CILPO75339 1184 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 RECQL4O94761 1208 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 OTUD3Q5T2D3 398 aaPredicted RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 SLC41A1Q8IVJ1 513 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 PQLC1Q8N2U9 271 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 NDNQ99608 321 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 ULBP1Q9BZM6 244 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CDH22Q9UJ99 828 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CNTNAP2Q9UHC6 1331 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 MYH11P35749 1972 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 PEX10O60683 326 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 FBXO21O94952 628 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 MYCP01106 439 aaPredicted RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 PYGLP06737 847 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CSH1P0DML2 217 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 CSH2P0DML3 217 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 NELFEP18615 380 aaKnown RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 PIK3R1P27986 724 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 KLF10Q13118 480 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 GJC2Q5T442 439 aaPredicted RBP13.53□□□□□ -0.24
DDX54-201ENST00000306014 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 WNT8BQ93098 351 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 RUBCNLQ9H714 662 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 RRAGCQ9HB90 399 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 SLC7A8Q9UHI5 535 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 VCLP18206 1134 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 NFKB1P19838 968 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 FASP25445 335 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 PEX2P28328 305 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 PCYT1AP49585 367 aa13.53□□□□□ -0.24
DDX54-201ENST00000306014 POU4F1Q01851 419 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms