RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 RNF149Q8NC42 400 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 TSPAN14Q8NG11 270 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 SREK1Q8WXA9 508 aaKnown RBP9.65□□□□□ -0.86
LDB2-201ENST00000304523 GATA5Q9BWX5 397 aaPredicted RBP9.65□□□□□ -0.86
LDB2-201ENST00000304523 ILKAPQ9H0C8 392 aaPredicted RBP9.65□□□□□ -0.86
LDB2-201ENST00000304523 C2orf40Q9H1Z8 148 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 FZD8Q9H461 694 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 WDR55Q9H6Y2 383 aaPredicted RBP9.65□□□□□ -0.86
LDB2-201ENST00000304523 TBCCD1Q9NVR7 557 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 SYBUQ9NX95 663 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 ZNHIT2Q9UHR6 403 aa9.65□□□□□ -0.86
LDB2-201ENST00000304523 BARX2Q9UMQ3 279 aaPredicted RBP9.65□□□□□ -0.86
LDB2-201ENST00000304523 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 COQ9O75208 318 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 RNASEH2AO75792 299 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 RAD17O75943 681 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 H6PDO95479 791 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 MPOP05164 745 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 POLBP06746 335 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ERVK-10P10266 1014 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SPRP35270 261 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 PTPN9P43378 593 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 PSMD8P48556 350 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 STAT5BP51692 787 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 PKNOX1P55347 436 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SESN2P58004 480 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 OSTNP61366 133 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SLC6A3Q01959 620 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 NSUN2Q08J23 767 aaKnown RBP eCLIP9.64□□□□□ -0.87
LDB2-201ENST00000304523 FRG1Q14331 258 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 STXBP2Q15833 593 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 MGAT5BQ3V5L5 792 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 KLHL35Q6PF15 583 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ZNF554Q86TJ5 538 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CARM1Q86X55 608 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TMEM192Q8IY95 271 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 BBS5Q8N3I7 341 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 GALNT4Q8N4A0 578 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CNTD1Q8N815 330 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TRPC4APQ8TEL6 797 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CENPIQ92674 756 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 PGBD4Q96DM1 585 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CSPG4P5Q96PW8 444 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 DRC3Q9H069 523 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ACAD9Q9H845 621 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 RPF1Q9H9Y2 349 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 ZBTB26Q9HCK0 441 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 OXSMQ9NWU1 459 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 USP3Q9Y6I4 520 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 COL4A5P29400 1685 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 IGKV6-21A0A0C4DH24 114 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 GOLGA8QA0A0J9YX86 632 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 A0A1B0GTW7 788 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 C7orf72A4D263 438 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 GOLGA8OA6NCC3 632 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 GOLGA8NF8WBI6 632 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 FARP2O94887 1054 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 UBA1P22314 1058 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 EPHA3P29320 983 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 RPL14P50914 215 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 NDST1P52848 882 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TUBA4AP68366 448 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 PDK1Q15118 436 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 EEF1DP3Q658K8 133 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 SEL1L3Q68CR1 1132 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 FSTL4Q6MZW2 842 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 PMF1Q6P1K2 205 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CROCCP3Q8IVE0 287 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TMEM130Q8N3G9 435 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 COLGALT1Q8NBJ5 622 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 TEPSINQ96N21 525 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 OSBPL11Q9BXB4 747 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 CDT1Q9H211 546 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 EFCAB1Q9HAE3 211 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 MID2Q9UJV3 735 aa9.64□□□□□ -0.87
LDB2-201ENST00000304523 ZNF638Q14966 1978 aaKnown RBP9.64□□□□□ -0.87
LDB2-201ENST00000304523 A0A096LPK6 155 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 GRID2O43424 1007 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 LTFP02788 710 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 AMHP03971 560 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 C8BP07358 591 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 CHRNGP07510 517 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 HSPA1AP0DMV8 641 aaKnown RBP9.63□□□□□ -0.87
LDB2-201ENST00000304523 HSPA1BP0DMV9 641 aaKnown RBP9.63□□□□□ -0.87
LDB2-201ENST00000304523 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
LDB2-201ENST00000304523 MPSTP25325 297 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 CHRNA5P30532 468 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 MLH1P40692 756 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 CSRP3P50461 194 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 TMEM132BQ14DG7 1078 aa9.63□□□□□ -0.87
LDB2-201ENST00000304523 SH3D19Q5HYK7 790 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms