RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ULBP1Q9BZM6 244 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 TMEM216Q9P0N5 145 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 HBS1LQ9Y450 684 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 NCF1BA6NI72 391 aaPredicted RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 NCF1CA8MVU1 366 aaPredicted RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 NCF1P14598 390 aaPredicted RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 HNRNPLP14866 589 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■□□□ 12
SDC2-201ENST00000302190 ZNF157P51786 506 aaPredicted RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 IRGCQ6NXR0 463 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 PACS1Q6VY07 963 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 KCNMB4Q86W47 210 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 UTP4Q969X6 686 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 MIPEPQ99797 713 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 FRMD8Q9BZ67 464 aaPredicted RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 BLOC1S6Q9UL45 172 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 GAS2O43903 313 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 MFSD11O43934 449 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 MCF2P10911 925 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 FDFT1P37268 417 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 MFSD4BQ5TF39 518 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 WSCD1Q658N2 575 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 TREML1Q86YW5 311 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 TTC39CQ8N584 583 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 CDC26Q8NHZ8 85 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 CSPG4P5Q96PW8 444 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 AGAP2Q99490 1192 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 UBE2OQ9C0C9 1292 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 NMRAL1Q9HBL8 299 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 UBQLN1Q9UMX0 589 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 A0A0A0MRY4 1105 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ZSCAN9O15535 394 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 TRIM13O60858 407 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 OAZ1P54368 228 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 GALNTL6Q49A17 601 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 AGKQ53H12 422 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 CERS2Q96G23 380 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 SPATA13Q96N96 652 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 NDNQ99608 321 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 FAM8A1Q9UBU6 413 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 COL11A1P12107 1806 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 PABPN1LA6NDY0 278 aaKnown RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 C9JVG2 144 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 TCEA3O75764 348 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 AMHP03971 560 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 HNRNPCP07910 306 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■■■■□ 19.7
SDC2-201ENST00000302190 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 GM2AP17900 193 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ERCC2P18074 760 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 MAPK10P53779 464 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 CYLC2Q14093 348 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 FUT11Q495W5 492 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 KCTD4Q8WVF5 259 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 FICDQ9BVA6 458 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 GPBP1L1Q9HC44 474 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 CHRAC1Q9NRG0 131 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 SNX15Q9NRS6 342 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 SLC7A8Q9UHI5 535 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 PPP2R3BQ9Y5P8 575 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ADGRA2Q96PE1 1338 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 SLC15A5A6NIM6 579 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 SLC25A27O95847 323 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ADORA2AP29274 412 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 MOGSQ13724 837 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ZNF460Q14592 562 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ACAP1Q15027 740 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 FAM83EQ2M2I3 478 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ANO4Q32M45 955 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 BNC2Q6ZN30 1099 aaPredicted RBP14.34□□□□□ -0.11
SDC2-201ENST00000302190 TDRPQ86YL5 185 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ZFP42Q96MM3 310 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 GRIP2Q9C0E4 1043 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 CPA4Q9UI42 421 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 ITGA11Q9UKX5 1188 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 PPM1HQ9ULR3 514 aa14.34□□□□□ -0.11
SDC2-201ENST00000302190 PDHXO00330 501 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 POMCP01189 267 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 FGFR1P11362 822 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 CCNB1P14635 433 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 SP100P23497 879 aaPredicted RBP14.33□□□□□ -0.11
SDC2-201ENST00000302190 ATICP31939 592 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 SERPINB8P50452 374 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 TUBP50607 506 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 ESRRGP62508 458 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 PLOD1Q02809 727 aaPredicted RBP14.33□□□□□ -0.11
SDC2-201ENST00000302190 TSTA3Q13630 321 aaPredicted RBP14.33□□□□□ -0.11
SDC2-201ENST00000302190 FBXO48Q5FWF7 155 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 ZNF470Q6ECI4 717 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 GPRC5AQ8NFJ5 357 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 LENG1Q96BZ8 264 aaPredicted RBP14.33□□□□□ -0.11
SDC2-201ENST00000302190 EIF2AQ9BY44 585 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms