RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 NDUFAB1O14561 156 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 HMGA1P17096 107 aaKnown RBP26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 MSH2P43246 934 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 KLHL38Q2WGJ6 581 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 NADSYN1Q6IA69 706 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 FBXL22Q6P050 247 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 LRRC8BQ6P9F7 803 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 RTL3Q8N8U3 475 aaKnown RBP26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 GDAP1Q8TB36 358 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 FERMT1Q9BQL6 677 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 XAB2Q9HCS7 855 aaKnown RBP26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 SYBUQ9NX95 663 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 CDH23Q9H251 3354 aa26.26■■□□□ 1.79
SDCCAG3-201ENST00000298537 GOLGA8RI6L899 631 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ABLIM3O94929 683 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 APOEP02649 317 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ATP2A2P16615 1042 aaKnown RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 DSG1Q02413 1049 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 CASC4Q6P4E1 433 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 FAM43BQ6ZT52 329 aaPredicted RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ATPAF2Q8N5M1 289 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 PPM1NQ8N819 430 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 SPATA22Q8NHS9 363 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZNF461Q8TAF7 563 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 OXNAD1Q96HP4 312 aaPredicted RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 TEKT5Q96M29 485 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 TTLL2Q9BWV7 592 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 GMNCA6NCL1 334 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 A6NNZ2 444 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 FGF10O15520 208 aaPredicted RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 CSPG5O95196 566 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 SPATA31D3P0C874 917 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 PAPOLAP51003 745 aaKnown RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 TUBB8Q3ZCM7 444 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 SPATA31D4Q6ZUB0 917 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 CTAGE3PQ8IX95 158 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ANKLE1Q8NAG6 615 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 C1orf74Q96LT6 269 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZNF512Q96ME7 567 aaPredicted RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 GBA3Q9H227 469 aa26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 C12orf65Q9H3J6 166 aaKnown RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 AFF4Q9UHB7 1163 aaKnown RBP26.25■■□□□ 1.79
SDCCAG3-201ENST00000298537 ARHGAP42A6NI28 874 aa26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 KIAA0355O15063 1070 aa26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 IGLV3-27P01718 113 aa26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 UBE2OQ9C0C9 1292 aaKnown RBP26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 EIF2B3Q9NR50 452 aaKnown RBP26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 PTPRSQ13332 1948 aa26.24■■□□□ 1.79
SDCCAG3-201ENST00000298537 CCNB1P14635 433 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 TSHRP16473 764 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 PSEN1P49768 467 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZNF473Q8WTR7 871 aaKnown RBP26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 SLC44A1Q8WWI5 657 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 CENPTQ96BT3 561 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 YME1L1Q96TA2 773 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 OXCT2Q9BYC2 517 aaPredicted RBP26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 CSH1P0DML2 217 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 CSH2P0DML3 217 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 AFMIDQ63HM1 303 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 KCTD11Q693B1 232 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 NECAB2Q7Z6G3 386 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 STAMBPL1Q96FJ0 436 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 BTN2A3PQ96KV6 586 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 BRD8Q9H0E9 1235 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 YIPF1Q9Y548 306 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 CHD7Q9P2D1 2997 aa26.23■■□□□ 1.79
SDCCAG3-201ENST00000298537 MT-CYBP00156 380 aaPredicted RBP26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 SLC2A3P11169 496 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 TUFMP49411 452 aaKnown RBP26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 NRG1Q02297 640 aaPredicted RBP26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 PLD1Q13393 1074 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 OLA1Q9NTK5 396 aaKnown RBP26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZNF840PA6NDX5 716 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 AP2A1O95782 977 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 KRT4P19013 534 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 RFWD3Q6PCD5 774 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 TAX1BP1Q86VP1 789 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 ATP6V0D2Q8N8Y2 350 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 LRRC39Q96DD0 335 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZNF317Q96PQ6 595 aaPredicted RBP26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 PCDHA11Q9Y5I1 949 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 BPTFQ12830 3046 aa26.22■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZBBXA8MT70 800 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 F7P08709 466 aaPredicted RBP26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 CCNCP24863 283 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 WDR4P57081 412 aaKnown RBP26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 CDK16Q00536 496 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 CFAP52Q8N1V2 620 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 WBP2Q969T9 261 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 HMCESQ96FZ2 354 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 ZYG11BQ9C0D3 744 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 GKN1Q9NS71 199 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 SPG21Q9NZD8 308 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 FETUBQ9UGM5 382 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 DOCK4Q8N1I0 1966 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 SDR42E2A6NKP2 422 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 J3KR12 359 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 COCHO43405 550 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 TPH1P17752 444 aa26.21■■□□□ 1.79
SDCCAG3-201ENST00000298537 PRKCHP24723 683 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms