RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RNF180Q86T96 592 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 LDB1Q86U70 411 aaPredicted RBP9.52□□□□□ -0.89
PRDM9-201ENST00000296682 NPWQ8N729 165 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 GBP7Q8N8V2 638 aaPredicted RBP9.52□□□□□ -0.89
PRDM9-201ENST00000296682 BANPQ8N9N5 519 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 ZMIZ2Q8NF64 920 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 OR10T2Q8NGX3 314 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 CD99L2Q8TCZ2 262 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 GRAMD1AQ96CP6 724 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 SIGLEC10Q96LC7 697 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 OMDQ99983 421 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 TASP1Q9H6P5 420 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 NT5MQ9NPB1 228 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 ZMPSTE24O75844 475 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 DNAJB2P25686 324 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 NR2C2P49116 596 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 PGFP49763 221 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 SREBF2Q12772 1141 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF460Q14592 562 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 TTC9BQ8N6N2 239 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 GSTCDQ8NEC7 633 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 RPRD1AQ96P16 312 aaPredicted RBP9.52□□□□□ -0.89
PRDM9-201ENST00000296682 CYP4F12Q9HCS2 524 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 CHST12Q9NRB3 414 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 GDAP2Q9NXN4 497 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 PRKAG3Q9UGI9 489 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 DNAJC16Q9Y2G8 782 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 COMMD10Q9Y6G5 202 aa9.52□□□□□ -0.89
PRDM9-201ENST00000296682 PTPRDP23468 1912 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 A0A1W2PQH9 124 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 MEI4A8MW99 385 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 CFLARO15519 480 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 TYROBPO43914 113 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ENTPD5O75356 428 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PAGE1O75459 146 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 DGKIO75912 1065 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 MAGEA6P43360 314 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PLK1P53350 603 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SLC5A3P53794 718 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 LRRC36Q1X8D7 754 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PLEKHG4Q58EX7 1191 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ATG16L1Q676U5 607 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ALKAL1Q6UXT8 129 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 MAGEC3Q8TD91 643 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ALKBH8Q96BT7 664 aaKnown RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 RTP4Q96DX8 246 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 EXOC2Q96KP1 924 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SMPD4Q9NXE4 827 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 DAB1O75553 588 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ATP6V1G2O95670 118 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 MX2P20592 715 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SERPINB6P35237 376 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 RASSF2P50749 326 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 CRYMQ14894 314 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PSMD5Q16401 504 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 AGAP11Q8TF27 550 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 STMN2Q93045 179 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PPP1R10Q96QC0 940 aaKnown RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 NUDCD1Q96RS6 583 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 NPY6RQ99463 290 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 THTPAQ9BU02 230 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 CDH9Q9ULB4 789 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SLC12A8A0AV02 714 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SEPT4O43236 478 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PTPN3P26045 913 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 FDFT1P37268 417 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SP3Q02447 781 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ZBTB17Q13105 803 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 USP4Q13107 963 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PEX6Q13608 980 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 GALNTL6Q49A17 601 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 PTAR1Q7Z6K3 402 aaPredicted RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 WDR75Q8IWA0 830 aaKnown RBP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 QKIQ96PU8 341 aaKnown RBP eCLIP9.51□□□□□ -0.89
PRDM9-201ENST00000296682 CYP2S1Q96SQ9 504 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 SP110Q9HB58 689 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 ARL8BQ9NVJ2 186 aa9.51□□□□□ -0.89
PRDM9-201ENST00000296682 FCHO1O14526 889 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 OPHN1O60890 802 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 RASSF9O75901 435 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 FYNP06241 537 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TUSC3Q13454 348 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CNGA3Q16281 694 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PARP6Q2NL67 630 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 ACCSLQ4AC99 568 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 RAP1GAP2Q684P5 730 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NSMCE1Q8WV22 266 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CASP10Q92851 521 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 FBXO32Q969P5 355 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SCLYQ96I15 445 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TSPAN18Q96SJ8 248 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NDNQ99608 321 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms