RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 APCDD1Q8J025 514 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 LGI2Q8N0V4 545 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 OR14C36Q8NHC7 312 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 PTPRN2Q92932 1015 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 FAM131CQ96AQ9 280 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 CRELD1Q96HD1 420 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 SERAC1Q96JX3 654 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 RPL10LQ96L21 214 aaKnown RBP16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 TJP2Q9UDY2 1190 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 CAPN9O14815 690 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 LDOC1O95751 146 aaPredicted RBP16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 IL1BP01584 269 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 C1SP09871 688 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 CDK4P11802 303 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 TACR2P21452 398 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 DRD3P35462 400 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 ACADSBP45954 432 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 ARRB1P49407 418 aaPredicted RBP16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 CLDN6P56747 220 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 STIM1Q13586 685 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 MEA1Q16626 185 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 ZC3H12AQ5D1E8 599 aaKnown RBP16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 BTN2A3PQ96KV6 586 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 KREMEN1Q96MU8 473 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
TMEM41A-201ENST00000296254 ASXL3Q9C0F0 2248 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 E5RJQ4 531 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 F5H5T6 163 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 VAV1P15498 845 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 ABCG1P45844 678 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 SLC12A1Q13621 1099 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 SLC45A4Q5BKX6 768 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 DENND1BQ6P3S1 775 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 OXR1Q8N573 874 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 EID2Q8N6I1 236 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 TSC1Q92574 1164 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 ERVMER34-1Q9H9K5 563 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 POPDC2Q9HBU9 364 aa16.49■□□□□ 0.23
TMEM41A-201ENST00000296254 A0A1B0GVM2 712 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 TCAF2A6NFQ2 919 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 TLR4O00206 839 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 TRUB2O95900 331 aaKnown RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 JUPP14923 745 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 PDGFRAP16234 1089 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 NNMTP40261 264 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 PPP1R2P41236 205 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 RXRGP48443 463 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 NUMBP49757 651 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 METAP1P53582 386 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 PITX1P78337 314 aaPredicted RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 SULT2A1Q06520 285 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 EIF4EBP2Q13542 120 aaPredicted RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 HES3Q5TGS1 186 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 TTC39BQ5VTQ0 682 aaPredicted RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 CXorf57Q6NSI4 855 aaKnown RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 FOXR2Q6PJQ5 311 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 KANSL1Q7Z3B3 1105 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 CIR1Q86X95 450 aaPredicted RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 MFSD2AQ8NA29 543 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 FRS2Q8WU20 508 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 PRMT1Q99873 361 aaKnown RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 CYTH4Q9UIA0 394 aa16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 HOOK1Q9UJC3 728 aaKnown RBP16.48■□□□□ 0.23
TMEM41A-201ENST00000296254 KCNU1A8MYU2 1149 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 SLC7A4O43246 635 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 PLRG1O43660 514 aaKnown RBP16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 KRT5P13647 590 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 NUCB2P80303 420 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 PDCLQ13371 301 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 FBXL19Q6PCT2 694 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 TMEM110Q86TL2 294 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 IQCHQ86VS3 1027 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 TRIM59Q8IWR1 403 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 PIP4K2CQ8TBX8 421 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 TIGD1Q96MW7 591 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 MED15Q96RN5 788 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 THAP9Q9H5L6 903 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 ARHGAP20Q9P2F6 1191 aa16.47■□□□□ 0.23
TMEM41A-201ENST00000296254 HELZ2Q9BYK8 2649 aaKnown RBP16.46■□□□□ 0.23
TMEM41A-201ENST00000296254 TBC1D3DA0A087WVF3 549 aa16.46■□□□□ 0.23
TMEM41A-201ENST00000296254 TBC1D3IA0A087WXS9 549 aa16.46■□□□□ 0.23
TMEM41A-201ENST00000296254 TBC1D3EA0A087X179 549 aa16.46■□□□□ 0.23
TMEM41A-201ENST00000296254 TBC1D3KA0A087X1G2 549 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms