RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 MSANTD2Q6P1R3 559 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 CES3Q6UWW8 571 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 CDKL3Q8IVW4 592 aaPredicted RBP10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 SCML4Q8N228 414 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 PAF1Q8N7H5 531 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 ZFYVE19Q96K21 471 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 RUNDC3BQ96NL0 473 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 IPO11Q9UI26 975 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 HPCAL4Q9UM19 191 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 CHMP2BQ9UQN3 213 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 ALPK3Q96L96 1907 aa10.06□□□□□ -0.8
PPP4R1-201ENST00000285124 COL6A3P12111 3177 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 PMPCBO75439 489 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 PTPN2P17706 415 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 SERPINB6P35237 376 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 GARSP41250 739 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 EIF4EBP2Q13542 120 aaPredicted RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 SHKBP1Q8TBC3 707 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 SH3RF2Q8TEC5 729 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 ART4Q93070 314 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 TMA16Q96EY4 203 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 GDF15Q99988 308 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 MUC3BQ9H195 1237 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 NT5MQ9NPB1 228 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 RBM22Q9NW64 420 aaKnown RBP eCLIP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 IL1RAPL1Q9NZN1 696 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 PCDHA11Q9Y5I1 949 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 RASA4BC9J798 803 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 RASA4O43374 803 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 RAMP2O60895 175 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 OAS1P00973 400 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 F7P08709 466 aaPredicted RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 VIPR2P41587 438 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 NR2C2P49116 596 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 ERVK-21P61565 698 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 ANO4Q32M45 955 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 PPP1R21Q6ZMI0 780 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 BZW1Q7L1Q6 419 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 PSTKQ8IV42 348 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 SH2D3CQ8N5H7 860 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 DNAAF3Q8N9W5 541 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 TIFAQ96CG3 184 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 CFAP36Q96G28 342 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 MYRFLQ96LU7 910 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 CDC42EP4Q9H3Q1 356 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 SP110Q9HB58 689 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 RSPH14Q9UHP6 348 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 TSC2P49815 1807 aa10.05□□□□□ -0.8
PPP4R1-201ENST00000285124 POC1B-GALNT4F8VUJ3 575 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 TRIM24O15164 1050 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 CCNB1P14635 433 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 SSTR1P30872 391 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 WASHC5Q12768 1159 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 HSP90B2PQ58FF3 399 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 GET4Q7L5D6 327 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 ARID3BQ8IVW6 561 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 RTL3Q8N8U3 475 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 FERMT1Q9BQL6 677 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 CLEC4EQ9ULY5 219 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 TRAV19A0A0A6YYK7 116 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 ARHGAP42A6NI28 874 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 H3BQF6 201 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 ATP9BO43861 1147 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 SNAP91O60641 907 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 STK10O94804 968 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 PRAMEF12O95522 483 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 RB1P06400 928 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 NFKB1P19838 968 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 PTPN3P26045 913 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 CREMQ03060 361 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 SLC10A7Q0GE19 358 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 PAFAH1B3Q15102 231 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 LONRF1Q17RB8 773 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 RNASEH2BQ5TBB1 312 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 TRIM68Q6AZZ1 485 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 DRICH1Q6PGQ1 229 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 POTEHQ6S545 545 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 MICALCLQ6ZW33 695 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 TMC8Q8IU68 726 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 CMTM8Q8IZV2 173 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 IPMKQ8NFU5 416 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 RIN3Q8TB24 985 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 WHRNQ9P202 907 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 PAK5Q9P286 719 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 RWDD3Q9Y3V2 267 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 WNT6Q9Y6F9 365 aa10.04□□□□□ -0.8
PPP4R1-201ENST00000285124 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms