RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CBX4O00257 560 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 GFRA2O00451 464 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 NPC1O15118 1278 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 MAP3K13O43283 966 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 RAMP2O60895 175 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 LRCH4O75427 683 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 RPP40O75818 363 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 LRIG2O94898 1065 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ACADMP11310 421 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 RHOQP17081 205 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ARL4AP40617 200 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 MAGEA1P43355 309 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 STK19P49842 368 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 KRT83P78385 493 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ECT2LQ008S8 904 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 SULT2A1Q06520 285 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 SLC12A1Q13621 1099 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 SIM2Q14190 667 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 MESDQ14696 234 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 CA9Q16790 459 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 HADHQ16836 314 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 ASTE1Q2TB18 679 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 USP39Q53GS9 565 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 KCNT1Q5JUK3 1230 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ERMARDQ5T6L9 678 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 FAM72AQ5TYM5 149 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 FAM72DQ6L9T8 149 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 CXorf57Q6NSI4 855 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 KIAA1211LQ6NV74 962 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 BNIPLQ7Z465 357 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 KIAA1328Q86T90 577 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 SETD3Q86TU7 594 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 FAM72BQ86X60 149 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 RHOT2Q8IXI1 618 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 CCDC170Q8IYT3 715 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ATP11CQ8NB49 1132 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 MDGA1Q8NFP4 955 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 GANCQ8TET4 914 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 RFFLQ8WZ73 363 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ANP32BQ92688 251 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 NKD2Q969F2 451 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 PEBP4Q96S96 227 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 PHOX2BQ99453 314 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 GABRG3Q99928 467 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 BAG1Q99933 345 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 NCAPGQ9BPX3 1015 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 MAGEB5Q9BZ81 275 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 OSBPL2Q9H1P3 480 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 SLC6A17Q9H1V8 727 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 CATSPERBQ9H7T0 1116 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 GRPEL1Q9HAV7 217 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 OSGEPQ9NPF4 335 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.71□□□□□ -1.34
CD44-204ENST00000279452 KLHL11Q9NVR0 708 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 IMPACTQ9P2X3 320 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 UVRAGQ9P2Y5 699 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 THAP10Q9P2Z0 257 aaPredicted RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 NCDNQ9UBB6 729 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 INTS6Q9UL03 887 aaKnown RBP6.71□□□□□ -1.34
CD44-204ENST00000279452 HPCAL4Q9UM19 191 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 ERVW-1Q9UQF0 538 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 TTC28Q96AY4 2481 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 IGLV3-10A0A075B6K4 115 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 A0A0D9SEW6 157 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 DRGXA6NNA5 263 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 TTC34A8MYJ7 566 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 H3BRJ5 948 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 DFFAO00273 331 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 FGF10O15520 208 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 SPOPO43791 374 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 SNAP91O60641 907 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 RNASEH1O60930 286 aaKnown RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 NDUFA10O95299 355 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PAPSS2O95340 614 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 SRPRAP08240 638 aaKnown RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 HNRNPLP14866 589 aaKnown RBP eCLIP6.7□□□□□ -1.34
CD44-204ENST00000279452 TCF4P15884 667 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 GABRG2P18507 467 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 NDUFV2P19404 249 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 L1CAMP32004 1257 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 ETFBP38117 255 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 RECQLP46063 649 aaPredicted RBP6.7□□□□□ -1.34
CD44-204ENST00000279452 MAPKAPK2P49137 400 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 DNA2P51530 1060 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 GSDMDP57764 484 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 GNA12Q03113 381 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 SCAPQ12770 1279 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 ACAP1Q15027 740 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 PTPRNQ16849 979 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 LINGO4Q6UY18 593 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 LEKR1Q6ZMV7 388 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 MAMSTRQ6ZN01 415 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 ARMCX6Q7L4S7 300 aa6.7□□□□□ -1.34
CD44-204ENST00000279452 FAM124AQ86V42 546 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms