RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MLPHQ9BV36 600 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 UGT1A7Q9HAW7 530 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 UGT1A10Q9HAW8 530 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 UGT1A8Q9HAW9 530 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 CASS4Q9NQ75 786 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 TLR8Q9NR97 1041 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 OLA1Q9NTK5 396 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 SAMD15Q9P1V8 674 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 HTTP42858 3142 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 SCN5AQ14524 2016 aa9.82□□□□□ -0.84
TRIM55-201ENST00000276573 ATXN2Q99700 1313 aaKnown RBP9.82□□□□□ -0.84
TRIM55-201ENST00000276573 ARHGAP42A6NI28 874 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TRIM49D1C9J1S8 452 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 DFFAO00273 331 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PSMD3O43242 534 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CACNG3O60359 315 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 SNX3O60493 162 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MAFKO60675 156 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 KRT37O76014 449 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 KIAA0754O94854 1291 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TBX18O95935 607 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CSH1P0DML2 217 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CSH2P0DML3 217 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CCNB1P14635 433 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ALDH7A1P49419 539 aaKnown RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 IKBKEQ14164 716 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TRIM60Q495X7 471 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PIK3R6Q5UE93 754 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 HHATQ5VTY9 493 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 LVRNQ6Q4G3 990 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ARHGAP36Q6ZRI8 547 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF683Q8IZ20 524 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 FBXO22Q8NEZ5 403 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 OR52K1Q8NGK4 314 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 SEPT5Q99719 369 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CRISPLD2Q9H0B8 497 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CWH43Q9H720 699 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 FGFR1OP2Q9NVK5 253 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PIH1D1Q9NWS0 290 aaKnown RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 SYBUQ9NX95 663 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 GRID1Q9ULK0 1009 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 CDY1Q9Y6F8 540 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PLXNA3P51805 1871 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 GOLGA6L7A0A1B0GV03 622 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 SLC38A8A6NNN8 435 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MATN3O15232 486 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TM9SF1O15321 606 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ADAM12O43184 909 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 USP12O75317 370 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 KRT38O76015 456 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ZDHHC11BP0C7U3 371 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PYGBP11216 843 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PGAM1P18669 254 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 NPY2RP49146 381 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 SERPINB9P50453 376 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 OLIG2Q13516 323 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PRPSAP1Q14558 356 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ITIH4Q14624 930 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 PDK4Q16654 411 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MS4A13Q5J8X5 152 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 RNF187Q5TA31 235 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 RGS9BPQ6ZS82 235 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 LRRC49Q8IUZ0 686 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 KLHDC8BQ8IXV7 354 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ATPAF2Q8N5M1 289 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 OTUD6BQ8N6M0 293 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 ATP6V0D2Q8N8Y2 350 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 TCP10LQ8TDR4 215 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 GIPC2Q8TF65 315 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 VWCEQ96DN2 955 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MTBPQ96DY7 904 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 IL12RB2Q99665 862 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 BEGAINQ9BUH8 593 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 UBE2OQ9C0C9 1292 aaKnown RBP9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MPP6Q9NZW5 540 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MARCH2Q9P0N8 246 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 FNIP2Q9P278 1114 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 MTRRQ9UBK8 725 aa9.81□□□□□ -0.84
TRIM55-201ENST00000276573 NUP205Q92621 2012 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 FNDC1Q4ZHG4 1894 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 MYO18AQ92614 2054 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 MYO1CO00159 1063 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 RFPL1O75677 317 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 OAS1P00973 400 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 POLBP06746 335 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 RHOQP17081 205 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 NEK3P51956 506 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 SF3A3Q12874 501 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 CRYMQ14894 314 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 SEPT7Q16181 437 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 SPANXN3Q5MJ09 141 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 C10orf120Q5SQS8 335 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms