RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 C16orf89Q6UX73 402 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF606Q8WXB4 792 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 WNK4Q96J92 1243 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 PRMT6Q96LA8 375 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 DRC3Q9H069 523 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRPV6Q9H1D0 765 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 SMOXQ9NWM0 555 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 TUBA8Q9NY65 449 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 VPS28Q9UK41 221 aa9.39□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF541Q9H0D2 1346 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM155AB1AL88 458 aaPredicted RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CFAP99D6REC4 459 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 APOC4-APOC2K7ER74 178 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 MCF2LO15068 1137 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 AKAP10O43572 662 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 APOC2P02655 101 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 HLA-DOAP06340 250 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CHRNGP07510 517 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 APRTP07741 180 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 NR4A1P22736 598 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PSMA2P25787 234 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 EPHX2P34913 555 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 IDUAP35475 653 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 NPTX2P47972 431 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 JAG1P78504 1218 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ROR1Q01973 937 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 DPYSQ14117 519 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CCDC153Q494R4 210 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 FSCBQ5H9T9 825 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM102BQ5T8I3 360 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 DEPDC1BQ8WUY9 529 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 HPS1Q92902 700 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CGREF1Q99674 301 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 FRMD8Q9BZ67 464 aaPredicted RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ST6GALNAC4Q9H4F1 302 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CYP26B1Q9NR63 512 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 RIC8BQ9NVN3 520 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 COPG2Q9UBF2 871 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 HES2Q9Y543 173 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 AP4S1Q9Y587 144 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 SNX13Q9Y5W8 968 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ST14Q9Y5Y6 855 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 LOXHD1Q8IVV2 1947 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 A0A087WXM4 84 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 RGSL1A5PLK6 1076 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRDMT1O14717 391 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 KCNH1O95259 989 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 C4BPAP04003 597 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ARSAP15289 507 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 MATN1P21941 496 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 MPSTP25325 297 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TKTP29401 623 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 POLR2IP36954 125 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 GSSP48637 474 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CRADDP78560 199 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 DMPKQ09013 629 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 NFATC3Q12968 1075 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PRKG1Q13976 671 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 OXA1LQ15070 435 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 LSM12Q3MHD2 195 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZACNQ401N2 412 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF394Q53GI3 561 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TIFABQ6ZNK6 161 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PGAM4Q8N0Y7 254 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PLD6Q8N2A8 252 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ADAMTS16Q8TE57 1224 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 DLG3Q92796 817 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 PGLYRP2Q96PD5 576 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ALPK1Q96QP1 1244 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CALN1Q9BXU9 219 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 EHD1Q9H4M9 534 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 TCF7L2Q9NQB0 619 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 XPNPEP3Q9NQH7 507 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 ATAD3AQ9NVI7 634 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 GID8Q9NWU2 228 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 CPQQ9Y646 472 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
HMGCLL1-201ENST00000274901 C1orf232A0A0U1RR37 186 aa9.37□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRIM64A6NGJ6 449 aa9.37□□□□□ -0.91
HMGCLL1-201ENST00000274901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
HMGCLL1-201ENST00000274901 WDR64B1ANS9 1081 aa9.37□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM47E-STBD1D6RA91 191 aa9.37□□□□□ -0.91
HMGCLL1-201ENST00000274901 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms