RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 COL5A1P20908 1838 aaPredicted RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 A0A1B0GTQ1 180 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 A0A1W2PPC4 97 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 RNF103O00237 685 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 PCDHGA12O60330 932 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 POLR2EP19388 210 aaKnown RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 DRD3P35462 400 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 PPP2CBP62714 309 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 PPP2CAP67775 309 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 ARID5AQ03989 594 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 ZBTB16Q05516 673 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 SMAD1Q15797 465 aaKnown RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 NUGGCQ68CJ6 796 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 ZNF776Q68DI1 518 aaPredicted RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 KIAA0895LQ68EN5 471 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 GJB7Q6PEY0 223 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 NCEH1Q6PIU2 408 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 CIR1Q86X95 450 aaPredicted RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 GATAD2AQ86YP4 633 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 PPM1KQ8N3J5 372 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 HJURPQ8NCD3 748 aaPredicted RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 IGSF8Q969P0 613 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 NT5C1BQ96P26 610 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 MED15Q96RN5 788 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 TSG101Q99816 390 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 CCDC86Q9H6F5 360 aaKnown RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 SGK2Q9HBY8 427 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 AJAP1Q9UKB5 411 aaPredicted RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 PLA2G4CQ9UP65 541 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 ERVW-1Q9UQF0 538 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 APOBEC2Q9Y235 224 aaKnown RBP9.27□□□□□ -0.93
TPM3-201ENST00000271850 TLR6Q9Y2C9 796 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 BECN2A8MW95 431 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 E5RJQ4 531 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 I6L893 689 aaPredicted RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 PLK4O00444 970 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 VILLO15195 856 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 IRAK2O43187 625 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 LUC7L3O95232 432 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 MOCS2O96007 188 aaPredicted RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 DNTTP04053 509 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ATP5BP06576 529 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 TACR2P21452 398 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 MZF1P28698 734 aaPredicted RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 CCT8P50990 548 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ADPRHP54922 357 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 YWHAEP62258 255 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 GCNT1Q02742 428 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 CYP4F3Q08477 520 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 NNTQ13423 1086 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 CST6Q15828 149 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ZC3H12AQ5D1E8 599 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 RAP1GAP2Q684P5 730 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 CXorf57Q6NSI4 855 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 DHRS13Q6UX07 377 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 USP30Q70CQ3 517 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 KANSL1Q7Z3B3 1105 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 MMAAQ8IVH4 418 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 UNC45BQ8IWX7 931 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 STK40Q8N2I9 435 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 CARNMT1Q8N4J0 409 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 WDTC1Q8N5D0 677 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 SAP25Q8TEE9 199 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 FRS2Q8WU20 508 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 SMARCE1Q969G3 411 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ALG14Q96F25 216 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 RPL10LQ96L21 214 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 FBRSQ9HAH7 460 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 METTL14Q9HCE5 456 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 ANLNQ9NQW6 1124 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 RMND1Q9NWS8 449 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 FBXL12Q9NXK8 326 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ARHGAP20Q9P2F6 1191 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 DKK4Q9UBT3 224 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 ADAMTS1Q9UHI8 967 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 SARDHQ9UL12 918 aa9.26□□□□□ -0.93
TPM3-201ENST00000271850 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
TPM3-201ENST00000271850 KNTC1P50748 2209 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 TRABD2BA6NFA1 517 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 FAM47DPA6NHR8 397 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 KCNU1A8MYU2 1149 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 TNFSF14O43557 240 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 FBXO21O94952 628 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 RDXP35241 583 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 PSMD8P48556 350 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 SLC11A2P49281 568 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 MARSP56192 900 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 STX17P56962 302 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 RACK1P63244 317 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 CENPCQ03188 943 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 KCNH2Q12809 1159 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms