RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 ATP6V1B1P15313 513 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 ZFXP17010 805 aaPredicted RBP17.44■□□□□ 0.38
SPG7-201ENST00000268704 DESP17661 470 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 XRCC1P18887 633 aaPredicted RBP17.44■□□□□ 0.38
SPG7-201ENST00000268704 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPG7-201ENST00000268704 OGFRL1Q5TC84 451 aaPredicted RBP17.44■□□□□ 0.38
SPG7-201ENST00000268704 SLC16A10Q8TF71 515 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 C18orf25Q96B23 403 aaPredicted RBP17.44■□□□□ 0.38
SPG7-201ENST00000268704 CNBD2Q96M20 576 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 CCDC28BQ9BUN5 200 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 A0A096LPK6 155 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 TK2O00142 265 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 POLBP06746 335 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 MLNP12872 115 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 ARL4AP40617 200 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 PTPN9P43378 593 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 EML3Q32P44 896 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 HSP90AA5PQ58FG0 334 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 MFSD3Q96ES6 412 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 CDRT15Q96T59 188 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 GINS2Q9Y248 185 aa17.44■□□□□ 0.38
SPG7-201ENST00000268704 DNAH12Q6ZR08 3092 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 NFKBIEO00221 500 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 JUNP05412 331 aaKnown RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 MYL4P12829 197 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 TNFAIP2Q03169 654 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 PPP2R5DQ14738 602 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 SPNS2Q8IVW8 549 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 METTL25Q8N6Q8 603 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 TRPM4Q8TD43 1214 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 FAM149B1Q96BN6 582 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 MPP4Q96JB8 637 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 KCNK16Q96T55 309 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 RBBP8Q99708 897 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 COPS7BQ9H9Q2 264 aaPredicted RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 KIAA1257Q9ULG3 409 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 CDY2AQ9Y6F7 541 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 CDY1Q9Y6F8 540 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 DNAJA2O60884 412 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 LMO2P25791 158 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 PIK3R1P27986 724 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 TTLL12Q14166 644 aaPredicted RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 FSCBQ5H9T9 825 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 RTKNQ9BST9 563 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 GATA5Q9BWX5 397 aaPredicted RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 NUF2Q9BZD4 464 aa17.43■□□□□ 0.38
SPG7-201ENST00000268704 UNKQ9C0B0 810 aaKnown RBP17.43■□□□□ 0.38
SPG7-201ENST00000268704 PAPPA2Q9BXP8 1791 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 HBP1O60381 514 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 TXNP10599 105 aaKnown RBP17.42■□□□□ 0.38
SPG7-201ENST00000268704 PIM1P11309 404 aaPredicted RBP17.42■□□□□ 0.38
SPG7-201ENST00000268704 TCN1P20061 433 aaPredicted RBP17.42■□□□□ 0.38
SPG7-201ENST00000268704 GLRBP48167 497 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 CNGA3Q16281 694 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 INSCQ1MX18 579 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 MAP3K21Q5TCX8 1036 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
SPG7-201ENST00000268704 PID1Q7Z2X4 250 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 SDCCAG8Q86SQ7 713 aaPredicted RBP17.42■□□□□ 0.38
SPG7-201ENST00000268704 FAM156AQ8NDB6 213 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 NLRP7Q8WX94 980 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 RCN3Q96D15 328 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 SLC4A7Q9Y6M7 1214 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 CCDC160A6NGH7 325 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 ATP9BO43861 1147 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 DPP6P42658 865 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 MS4A2Q01362 244 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 FLOT2Q14254 428 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 GADL1Q6ZQY3 521 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 SLC26A9Q7LBE3 791 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 DSELQ8IZU8 1212 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 LILRA2Q8N149 483 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 CPNE1Q99829 537 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 GRIP2Q9C0E4 1043 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 SMARCAD1Q9H4L7 1026 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 PSMD13Q9UNM6 376 aa17.42■□□□□ 0.38
SPG7-201ENST00000268704 CRTAMO95727 393 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 TFAP2AP05549 437 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 ENO3P13929 434 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 GLDCP23378 1020 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 GARSP41250 739 aaKnown RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 SULT1E1P49888 294 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 PDCD2Q16342 344 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 LSM12Q3MHD2 195 aaKnown RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 CCDC153Q494R4 210 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 LRRC23Q53EV4 343 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 IYDQ6PHW0 289 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 GALNT4Q8N4A0 578 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 PPP1R13LQ8WUF5 828 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 CATSPER2Q96P56 530 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 FAM96AQ9H5X1 160 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 A0A1B0GTW7 788 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 TSPAN1O60635 241 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 C2P06681 752 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms