RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SIRPGQ9P1W8 387 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CDH22Q9UJ99 828 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 POMPQ9Y244 141 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 EFR3BQ9Y2G0 817 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 MAD1L1Q9Y6D9 718 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CXorf49A8MYA2 514 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HCRTO43612 131 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 INHAP05111 366 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 FDFT1P37268 417 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 LPIN1Q14693 890 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC26A11Q86WA9 606 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 C17orf50Q8WW18 174 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ZMAT2Q96NC0 199 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 LHX5Q9H2C1 402 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ASB7Q9H672 318 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 APPL1Q9UKG1 709 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 FAF1Q9UNN5 650 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PIN4Q9Y237 131 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 DTNAQ9Y4J8 743 aa16.34■□□□□ 0.21
MAP1LC3B-201ENST00000268607 E9PBE3 544 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 COL6A2P12110 1019 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 IDO1P14902 403 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GPD2P43304 727 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GJA9P57773 515 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GK3PQ14409 553 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 BBS5Q8N3I7 341 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 FAM49BQ9NUQ9 324 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SNX9Q9Y5X1 595 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.21
MAP1LC3B-201ENST00000268607 H3BNX3 289 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LYPLA1O75608 230 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MIPP30301 263 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 COPAP53621 1224 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NAA20P61599 178 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C15orf59Q2T9L4 293 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LRRC38Q5VT99 294 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TMEM53Q6P2H8 277 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PGM2L1Q6PCE3 622 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 BTBD9Q96Q07 612 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ADPGKQ9BRR6 497 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CALN1Q9BXU9 219 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LIN28AQ9H9Z2 209 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TBCCD1Q9NVR7 557 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 HEY1Q9Y5J3 304 aa16.33■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MBLAC1A4D2B0 266 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 HTR3EA5X5Y0 456 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 UGT1A9O60656 530 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SNNO75324 88 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PTPN7P35236 360 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ALDH1A3P47895 512 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MMRN1Q13201 1228 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 STX3Q13277 289 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 IYDQ6PHW0 289 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ACOT1Q86TX2 421 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DEFB107AQ8IZN7 70 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 JADE3Q92613 823 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 UGT1A7Q9HAW7 530 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 UGT1A10Q9HAW8 530 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 UGT1A8Q9HAW9 530 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TSPAN16Q9UKR8 245 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SCN1AP35498 2009 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LOC100653049A0A140TA62 436 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ARHGAP10A1A4S6 786 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RFPL1O75677 317 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KRT34O76011 436 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SNRPAP09012 282 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 IGFBP6P24592 240 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TAP1Q03518 808 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TUBB3Q13509 450 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DPYSL3Q14195 570 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SNX17Q15036 470 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 OLFML1Q6UWY5 402 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DCUN1D1Q96GG9 259 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CNBD2Q96M20 576 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PRPF18Q99633 342 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MRPL45Q9BRJ2 306 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SPC25Q9HBM1 224 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 XAB2Q9HCS7 855 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DOLKQ9UPQ8 538 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KANSL1LA0AUZ9 987 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DNAJA2O60884 412 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZMPSTE24O75844 475 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KRT37O76014 449 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KDELR1P24390 212 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms