RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 PDE1BQ01064 536 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 SEMA3BQ13214 749 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 NAB1Q13506 487 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 SPANXN3Q5MJ09 141 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 TAF2Q6P1X5 1199 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 KYAT3Q6YP21 454 aaKnown RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 CCNJLQ8IV13 435 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 TMEM86AQ8N2M4 240 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 RAB3IL1Q8TBN0 382 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 MYLPFQ96A32 169 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-201ENST00000266679 WWP1Q9H0M0 922 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 CNGB3Q9NQW8 809 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 FBXW11Q9UKB1 542 aa13.21□□□□□ -0.29
CPSF6-201ENST00000266679 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 POLBP06746 335 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 AIF1P55008 147 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 SCAPQ12770 1279 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ACMSDQ8TDX5 336 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 CERS2Q96G23 380 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 RSRC1Q96IZ7 334 aaKnown RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 SLC9A7Q96T83 725 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 NAT9Q9BTE0 207 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 C9IYK1 514 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 HHLA1C9JL84 531 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 GSC2O15499 205 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ITM2AO43736 263 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 PLIN3O60664 434 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 GSRP00390 522 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 KCNA4P22459 653 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 GJA9P57773 515 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 ZBTB17Q13105 803 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 RCN2Q14257 317 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 PPM1JQ5JR12 505 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 MBLAC2Q68D91 279 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 GDF6Q6KF10 455 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-201ENST00000266679 BHLHA9Q7RTU4 235 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 MCUR1Q96AQ8 359 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 SMARCD1Q96GM5 515 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■□□□□ 9.1
CPSF6-201ENST00000266679 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 VANGL2Q9ULK5 521 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 Q9Y3F1 56 aa13.2□□□□□ -0.3
CPSF6-201ENST00000266679 NUP205Q92621 2012 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 AP2A1O95782 977 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 GP5P40197 560 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 GARSP41250 739 aaKnown RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ARL13BQ3SXY8 428 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 FAM91A1Q658Y4 838 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 C4orf50Q6ZRC1 276 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 CMC1Q7Z7K0 106 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 AZIN2Q96A70 460 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 CELF6Q96J87 481 aaKnown RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 RILPQ96NA2 401 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 APOL2Q9BQE5 337 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 EBF4Q9BQW3 602 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 MLPHQ9BV36 600 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 GBA3Q9H227 469 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 THAP1Q9NVV9 213 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TPBGLP0DKB5 382 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 GNAZP19086 355 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 NFKB1P19838 968 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 CD68P34810 354 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ABCG1P45844 678 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 PCLAFQ15004 111 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TIGD5Q53EQ6 642 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 EPAS1Q99814 870 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms