RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 EFHD2Q96C19 240 aaPredicted RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 OR52B2Q96RD2 323 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 PI4K2AQ9BTU6 479 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SLC4A5Q9BY07 1137 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 FOXP3Q9BZS1 431 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 B3GNT4Q9C0J1 378 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 HOXD1Q9GZZ0 328 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 NRDE2Q9H7Z3 1164 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 CYP26B1Q9NR63 512 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SHOC2Q9UQ13 582 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 DNM3Q9UQ16 869 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 IFT52Q9Y366 437 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 LTBP1Q14766 1721 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 IQANK1A0A1B0GTG1 560 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 FAM86B1E9PN63 330 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 MEIS2O14770 477 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 CYP3A4P08684 503 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 F7P08709 466 aaPredicted RBP8.96□□□□□ -0.97
VAPB-201ENST00000265619 FAM86B2P0C5J1 330 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 DSG3P32926 999 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 RPL22P35268 128 aaKnown RBP8.96□□□□□ -0.97
VAPB-201ENST00000265619 PSMC5P62195 406 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 ORC2Q13416 577 aaPredicted RBP8.96□□□□□ -0.97
VAPB-201ENST00000265619 ATG16L1Q676U5 607 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 OFCC1Q8IZS5 231 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 DSELQ8IZU8 1212 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 DTX3Q8N9I9 347 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 SGCDQ92629 289 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 SLCO4A1Q96BD0 722 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 CCDC138Q96M89 665 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 ZNF641Q96N77 438 aaPredicted RBP8.96□□□□□ -0.97
VAPB-201ENST00000265619 SLITRK1Q96PX8 696 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 PSD2Q9BQI7 771 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 RNPEPQ9H4A4 650 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 POLR1BQ9H9Y6 1135 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 PNPLA3Q9NST1 481 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 EMCNQ9ULC0 261 aa8.96□□□□□ -0.97
VAPB-201ENST00000265619 POLR2AP24928 1970 aaKnown RBP8.96□□□□□ -0.97
VAPB-201ENST00000265619 ICMTO60725 284 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 TBCAO75347 108 aaKnown RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 PROSCO94903 275 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 C8BP07358 591 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 ABCB1P08183 1280 aaPredicted RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 CSH1P0DML2 217 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 CSH2P0DML3 217 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 HOXA7P31268 230 aaPredicted RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 KLF10Q13118 480 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 ACAP2Q15057 778 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 PCSK7Q16549 785 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 NHSL2Q5HYW2 709 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 FAM219BQ5XKK7 198 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 MBLAC2Q68D91 279 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 SNX32Q86XE0 403 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 UNC45BQ8IWX7 931 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.96□□□□□ -0.98
VAPB-201ENST00000265619 UBR7Q8N806 425 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 SLC4A11Q8NBS3 891 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 SMARCAD1Q9H4L7 1026 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 NOL11Q9H8H0 719 aaKnown RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 PALMDQ9NP74 551 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 TBC1D22BQ9NU19 505 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 DNAJC28Q9NX36 388 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 XPO7Q9UIA9 1087 aaKnown RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 HOXC11O43248 304 aaPredicted RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 GMNNO75496 209 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 KLHL2O95198 593 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 KRT75O95678 551 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 PRKACBP22694 351 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 TGM1P22735 817 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 EPHX2P34913 555 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 SLC1A6P48664 564 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 GPC3P51654 580 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 TUBA4AP68366 448 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 FPGSQ05932 587 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 MAPK11Q15759 364 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 ATAD3BQ5T9A4 648 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 DCAF15Q66K64 600 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 LYPD8Q6UX82 237 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 NDUFAF2Q8N183 169 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 PSD4Q8NDX1 1056 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 FBXL20Q96IG2 436 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 KCNK16Q96T55 309 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 C11orf70Q9BRQ4 267 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 MRIQ9BWK5 157 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 GLT8D2Q9H1C3 349 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 PARVBQ9HBI1 364 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 SMOXQ9NWM0 555 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 HACD3Q9P035 362 aa8.96□□□□□ -0.98
VAPB-201ENST00000265619 NXF1Q9UBU9 619 aaKnown RBP8.96□□□□□ -0.98
VAPB-201ENST00000265619 ACOT8O14734 319 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 AURKAO14965 403 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 GAS7O60861 476 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 UNGP13051 313 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 ENO3P13929 434 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 PRKCAP17252 672 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 GNL1P36915 607 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 ARL1P40616 181 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 FAM47CQ5HY64 1035 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 CEP78Q5JTW2 689 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms