RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 WDR36Q8NI36 951 aaKnown RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 SLC22A8Q8TCC7 542 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 MTG1Q9BT17 334 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 GPSM2P81274 684 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 HERC3Q15034 1050 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 HPDLQ96IR7 371 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 NYAP2Q9P242 653 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 RAD54BQ9Y620 910 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 SPATA31A3Q5VYP0 1347 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 IFT172Q9UG01 1749 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 NDUFB10O96000 172 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 ATXN3P54252 364 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 GEMP55040 296 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 PIGWQ7Z7B1 504 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 FBXW8Q8N3Y1 598 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 VPS33AQ96AX1 596 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 KRCC1Q9NPI7 259 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 FANCFQ9NPI8 374 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 H2AFY2Q9P0M6 372 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 E9PBE3 544 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 PSMD12O00232 456 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 PDE2AO00408 941 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 TOB1P50616 345 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 PRKCEQ02156 737 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 ACVR2BQ13705 512 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 GTF3C2Q8WUA4 911 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 CUEDC1Q9NWM3 386 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 NKX1-2Q9UD57 310 aaPredicted RBP5.81□□□□□ -1.48
VCAN-201ENST00000265077 AP3M1Q9Y2T2 418 aa5.81□□□□□ -1.48
VCAN-201ENST00000265077 F5H423 210 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 DGKIO75912 1065 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 NUDT17P0C025 328 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CCNB1P14635 433 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RCVRNP35243 200 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TROAPQ12815 778 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TRAF3Q13114 568 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SV2CQ496J9 727 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SLC7A5P1Q8MH63 180 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 AHI1Q8N157 1196 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TUBA1CQ9BQE3 449 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TLR10Q9BXR5 811 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PFDN2Q9UHV9 154 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 KIF1AQ12756 1690 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GPR75-ASB3A0A0A6YYF3 556 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MSH4O15457 936 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GSTM4Q03013 218 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 USF2Q15853 346 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 MEA1Q16626 185 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 STYK1Q6J9G0 422 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 C6orf89Q6UWU4 347 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ERO1BQ86YB8 467 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 AMER2Q8N7J2 671 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GANCQ8TET4 914 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 HIPK3Q9H422 1215 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PSMD13Q9UNM6 376 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ASB3Q9Y575 518 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CD163L1Q9NR16 1453 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 I3L521 148 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TRDMT1O14717 391 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 ABCB1P08183 1280 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 MYL4P12829 197 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 FUT4P22083 530 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 FRG1Q14331 258 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 TIGD7Q6NT04 549 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 C12orf56Q8IXR9 622 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SETD9Q8NE22 299 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CIDECQ96AQ7 238 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 HES6Q96HZ4 224 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SENP2Q9HC62 589 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RAVER2Q9HCJ3 691 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 COMMD8Q9NX08 183 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 KCNK4Q9NYG8 393 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 USP20Q9Y2K6 914 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 DUSP10Q9Y6W6 482 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 B8ZZF3 427 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 C2CD2LO14523 706 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TOP3BO95985 862 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 RARBP10826 455 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CCT8P50990 548 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 POU5F1Q01860 360 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 C1DQ13901 141 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 TRIP4Q15650 581 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 FAM98BQ52LJ0 330 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 ABRAXAS1Q6UWZ7 409 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ANKRD13BQ86YJ7 626 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 HELQQ8TDG4 1101 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SEMA6BQ9H3T3 888 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TRIM13O60858 407 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 AKT1P31749 480 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SREBF1P36956 1147 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CNTN1Q12860 1018 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TTC7BQ86TV6 843 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 LILRB4Q8NHJ6 448 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 APOPT1Q96IL0 206 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SPRTNQ9H040 489 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 TDRD3Q9H7E2 651 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 COPS7BQ9H9Q2 264 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 EXOSC4Q9NPD3 245 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms