RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SOD2P04179 222 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 HAPLN1P10915 354 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 IL4RP24394 825 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TYK2P29597 1187 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 C1QTNF8P60827 252 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 PRAMEP78395 509 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 SPDYCQ5MJ68 293 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 KDM7AQ6ZMT4 941 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TP53INP2Q8IXH6 220 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ZNF567Q8N184 647 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 BADQ92934 168 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TOP1MTQ969P6 601 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 XPO6Q96QU8 1125 aaKnown RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 FICDQ9BVA6 458 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 SMOC2Q9H3U7 446 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CERS4Q9HA82 394 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TRIM49D1C9J1S8 452 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ADAM12O43184 909 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 CYBBP04839 570 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 RFC2P35250 354 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 KCNQ1P51787 676 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 PM20D1Q6GTS8 502 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TPGS1Q6ZTW0 290 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ZNF333Q96JL9 665 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 SCYL1Q96KG9 808 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 VAT1Q99536 393 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 ELAC2Q9BQ52 826 aaKnown RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
SSR3-201ENST00000265044 ATP13A1Q9HD20 1204 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 VPS28Q9UK41 221 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 TLK1Q9UKI8 766 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 YIPF1Q9Y548 306 aa9.54□□□□□ -0.88
SSR3-201ENST00000265044 NUP205Q92621 2012 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 FGF18O76093 207 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 PAMP19021 973 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 FGFR3P22607 806 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 IVDP26440 423 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 MAGEA11P43364 429 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 SCNN1BP51168 640 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 GEMP55040 296 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 TEX44Q53QW1 395 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 MFSD5Q6N075 450 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 ELMSAN1Q6PJG2 1045 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 DNAJB7Q7Z6W7 309 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 LINC00523Q86TU6 105 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 TMA16Q96EY4 203 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 PGM2Q96G03 612 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 TCF25Q9BQ70 676 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 TLR6Q9Y2C9 796 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 INSL6Q9Y581 213 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 C5orf60A6NFR6 353 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 GOLGA8TH3BQL2 631 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 PSMD3O43242 534 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 FYNP06241 537 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 GRIA1P42261 906 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 PAPOLAP51003 745 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 MLLT6P55198 1093 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 OXCT1P55809 520 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 BMPR2Q13873 1038 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 RAB41Q5JT25 222 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 FYB2Q5VWT5 728 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 SCD5Q86SK9 330 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 RIBC1Q8N443 379 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 ARL14EPQ8N8R7 260 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 C2orf15Q8WU43 125 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 PIK3R5Q8WYR1 880 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 HAPLN3Q96S86 360 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 LRRC40Q9H9A6 602 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 WDR6Q9NNW5 1121 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 MARCH5Q9NX47 278 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 PLK2Q9NYY3 685 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 SENP1Q9P0U3 644 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 FAM47DPA6NHR8 397 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 DGKIO75912 1065 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 SNRPAP09012 282 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 PMLP29590 882 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 CORO1AP31146 461 aaKnown RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 ARL1P40616 181 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 IFT88Q13099 833 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
SSR3-201ENST00000265044 CCDC149Q6ZUS6 474 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 NAT8LQ8N9F0 302 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 CCDC68Q9H2F9 335 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 ADAM7Q9H2U9 754 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.53□□□□□ -0.88
SSR3-201ENST00000265044 MTMR10Q9NXD2 777 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 CLIC5Q9NZA1 410 aa9.53□□□□□ -0.88
SSR3-201ENST00000265044 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 GCATO75600 419 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 GLUD1P00367 558 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 GJA1P17302 382 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 EN2P19622 333 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms