RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MAPRE1Q15691 268 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 FAM96AQ9H5X1 160 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 POPDC2Q9HBU9 364 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 NT5MQ9NPB1 228 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 TRPV2Q9Y5S1 764 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 PGM3O95394 542 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 ELNP15502 786 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 TMED1Q13445 227 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 VEPH1Q14D04 833 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 FAM110CQ1W6H9 321 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 SLC39A12Q504Y0 691 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 WNT8BQ93098 351 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 MOCOSQ96EN8 888 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 CSPG4P5Q96PW8 444 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 A0A0A0MRY4 1105 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 TSPAN3O60637 253 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 S100BP04271 92 aaPredicted RBP20.25■□□□□ 0.83
CSPG5-201ENST00000264723 TSPAN8P19075 237 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 DNAJB2P25686 324 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 FLT3LGP49771 235 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 ANO4Q32M45 955 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 FAM171A1Q5VUB5 890 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 UNC93AQ86WB7 457 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 CCNJLQ8IV13 435 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 CMASQ8NFW8 434 aaPredicted RBP20.25■□□□□ 0.83
CSPG5-201ENST00000264723 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 SLC7A6OSQ96CW6 309 aaPredicted RBP20.25■□□□□ 0.83
CSPG5-201ENST00000264723 SPATA13Q96N96 652 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 FICDQ9BVA6 458 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 OR12D3Q9UGF7 316 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 AFF4Q9UHB7 1163 aaKnown RBP20.25■□□□□ 0.83
CSPG5-201ENST00000264723 PGGT1BP53609 377 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 ARHGAP1Q07960 439 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 CSHL1Q14406 222 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 CERCAMQ5T4B2 595 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 HPS6Q86YV9 775 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 SH3TC2Q8TF17 1288 aa20.25■□□□□ 0.83
CSPG5-201ENST00000264723 TNRC6CQ9HCJ0 1690 aaKnown RBP20.24■□□□□ 0.83
CSPG5-201ENST00000264723 CCNB1P14635 433 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 PDE1CQ14123 709 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-201ENST00000264723 PACS1Q6VY07 963 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 MUC3BQ9H195 1237 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 RNF39Q9H2S5 420 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 FAF1Q9UNN5 650 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-201ENST00000264723 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 NOS2P35228 1153 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 PLIN5Q00G26 463 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 SEL1L3Q68CR1 1132 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 LCLAT1Q6UWP7 414 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 HBS1LQ9Y450 684 aaKnown RBP20.24■□□□□ 0.83
CSPG5-201ENST00000264723 MTSS1O43312 755 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 EEF1B2P24534 225 aaKnown RBP20.24■□□□□ 0.83
CSPG5-201ENST00000264723 NDUFV1P49821 464 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 MOGSQ13724 837 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 NUP93Q8N1F7 819 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 ZNF398Q8TD17 642 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 DENND1AQ8TEH3 1009 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 SMPD4Q9NXE4 827 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 CDYLQ9Y232 598 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 SNX10Q9Y5X0 201 aa20.24■□□□□ 0.83
CSPG5-201ENST00000264723 ITM2AO43736 263 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 FBXO21O94952 628 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 PIGNO95427 931 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 ATXN8OSP0DMR3 200 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 AXLP30530 894 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 ALDH7A1P49419 539 aaKnown RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 TUBP50607 506 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 IL1RL1Q01638 556 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 BLMHQ13867 455 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 KCNMB4Q86W47 210 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 SMARCD1Q96GM5 515 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 FAM105AQ9NUU6 356 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 MFSD11O43934 449 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 PQBP1O60828 265 aaKnown RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 ERCC2P18074 760 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 IRGCQ6NXR0 463 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 PCDH20Q8N6Y1 951 aaKnown RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 PCSK9Q8NBP7 692 aaKnown RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 FNIP1Q8TF40 1166 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 XYLT2Q9H1B5 865 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 NDFIP2Q9NV92 336 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 TRIM13O60858 407 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 SERPINB8P50452 374 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 CYP2R1Q6VVX0 501 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 ZDHHC17Q8IUH5 632 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 UTP4Q969X6 686 aaKnown RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 MFSD3Q96ES6 412 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 CERS2Q96G23 380 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 DMAP1Q9NPF5 467 aaPredicted RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 TMEM216Q9P0N5 145 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.23■□□□□ 0.83
CSPG5-201ENST00000264723 PCDHA11Q9Y5I1 949 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
CSPG5-201ENST00000264723 GRK2P25098 689 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms