RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ZNF57Q68EA5 555 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 KIAA0895Q8NCT3 520 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 CCNT2O60583 730 aaKnown RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 CYP1A1P04798 512 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 RPL21P46778 160 aaKnown RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 PANX3Q96QZ0 392 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 GSTK1Q9Y2Q3 226 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 NKRFO15226 690 aaKnown RBP eCLIP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 KCNH1O95259 989 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 HOXB8P17481 243 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ZSWIM7Q19AV6 140 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 SV2AQ7L0J3 742 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 EHD4Q9H223 541 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ZW10O43264 779 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 CCNA2P20248 432 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ARHGAP22Q7Z5H3 698 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 INVSQ9Y283 1065 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ACADMP11310 421 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 TNFRSF8P28908 595 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 GCLCP48506 637 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 NAA20P61599 178 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 GCNT1Q02742 428 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 VPS72Q15906 364 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 MCOLN3Q8TDD5 553 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 DMGDHQ9UI17 866 aaKnown RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 FCHO1O14526 889 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF605Q86T29 641 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 OSGEPL1Q9H4B0 414 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 DCXO43602 365 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF280DQ6N043 979 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 B3GNT6Q6ZMB0 384 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 TBL1YQ9BQ87 522 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 SLC25A23Q9BV35 468 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 ATP6V1HQ9UI12 483 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 UQCRBP14927 111 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 C1QTNF7Q9BXJ2 289 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 CATSPERZQ9NTU4 200 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF624Q9P2J8 865 aaPredicted RBP17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 DPP7Q9UHL4 492 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 BTN3A3O00478 584 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 ALADP13716 330 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 RCVRNP35243 200 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 GPSM1Q86YR5 675 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 STK32AQ8WU08 396 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 CENPIQ92674 756 aaPredicted RBP17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 YME1L1Q96TA2 773 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 BCL2L14Q9BZR8 327 aa17.77■□□□□ 0.44
NOTCH3-201ENST00000263388 A0A096LPK6 155 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 PTGES3LE9PB15 166 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 OR56A5P0C7T3 313 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 REEP1Q9H902 201 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 PAEPP09466 180 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 CLCN3P51790 818 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 VAT1Q99536 393 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 APBA2Q99767 749 aa17.77■□□□□ 0.43
NOTCH3-201ENST00000263388 CHADO15335 359 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 TSPAN9O75954 239 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 CCDC130P13994 396 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ETS1P14921 441 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 INO80DQ53TQ3 878 aaPredicted RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 AENQ8WTP8 325 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 POP5Q969H6 163 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ARHGAP28Q9P2N2 729 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 CORO2BQ9UQ03 480 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 FAM187BQ17R55 369 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF470Q6ECI4 717 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 MZT2BQ6NZ67 158 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 DHRSXQ8N5I4 330 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF606Q8WXB4 792 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 TMEM216Q9P0N5 145 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 TNPO3Q9Y5L0 923 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 SEC22BO75396 215 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 VAV1P15498 845 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 STK32CQ86UX6 486 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 GDF3Q9NR23 364 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 TAF6LQ9Y6J9 622 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 KLHL1Q9NR64 748 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 CNTNAP2Q9UHC6 1331 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 FGFR2P21802 821 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 PTPN3P26045 913 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 TBX4P57082 545 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 SERPINB11Q96P15 392 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 SLC12A8A0AV02 714 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 BCLAF3A2AJT9 711 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ALOX12P18054 663 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 ELAVL2Q12926 359 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 METTL6Q8TCB7 284 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 MGAT1P26572 445 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 DDX18Q9NVP1 670 aaKnown RBP17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 SH3GLB1Q9Y371 365 aa17.76■□□□□ 0.43
NOTCH3-201ENST00000263388 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms