RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 BBS7Q8IWZ6 715 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 GSPT2Q8IYD1 628 aaKnown RBP23.28■■□□□ 1.32
UFD1-201ENST00000263202 RIN3Q8TB24 985 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 HTR3CQ8WXA8 447 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 CDH22Q9UJ99 828 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 PRRC2BQ5JSZ5 2229 aaKnown RBP23.28■■□□□ 1.32
UFD1-201ENST00000263202 DFFAO00273 331 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 FSHRP23945 695 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 ECHS1P30084 290 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 RPL22P35268 128 aaKnown RBP23.27■■□□□ 1.32
UFD1-201ENST00000263202 ADCY8P40145 1251 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 MAPKAPK2P49137 400 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 CDH4P55283 916 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 ARID3BQ8IVW6 561 aaPredicted RBP23.27■■□□□ 1.32
UFD1-201ENST00000263202 EIF1ADQ8N9N8 165 aaKnown RBP23.27■■□□□ 1.32
UFD1-201ENST00000263202 P2RY11Q96G91 374 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 CLEC1BQ9P126 229 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 NFU1Q9UMS0 254 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 REV3LO60673 3130 aa23.27■■□□□ 1.32
UFD1-201ENST00000263202 HOXB8P17481 243 aaPredicted RBP23.26■■□□□ 1.31
UFD1-201ENST00000263202 OR1E1P30953 314 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 CPXM2Q8N436 756 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 DEPDC1BQ8WUY9 529 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 SNF8Q96H20 258 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 WHRNQ9P202 907 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 TCF3P15923 654 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 POU3F3P20264 500 aaPredicted RBP23.26■■□□□ 1.31
UFD1-201ENST00000263202 GPS1Q13098 491 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 ADGRE1Q14246 886 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 ZNF77Q15935 545 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 FAM182AQ5T1J6 154 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 TTC39BQ5VTQ0 682 aaPredicted RBP23.26■■□□□ 1.31
UFD1-201ENST00000263202 ZSCAN18Q8TBC5 510 aaPredicted RBP23.26■■□□□ 1.31
UFD1-201ENST00000263202 TSGA13Q96PP4 275 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 NEUROG2Q9H2A3 272 aa23.26■■□□□ 1.31
UFD1-201ENST00000263202 ARGLU1Q9NWB6 273 aaPredicted RBP23.26■■□□□ 1.31
UFD1-201ENST00000263202 A0A1B0GVM2 712 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 TCAF2A6NFQ2 919 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 C5orf60A6NFR6 353 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 CLDN11O75508 207 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 SEC31AO94979 1220 aaKnown RBP23.25■■□□□ 1.31
UFD1-201ENST00000263202 WEE1P30291 646 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 PAPOLAP51003 745 aaKnown RBP23.25■■□□□ 1.31
UFD1-201ENST00000263202 ZNF33AQ06730 810 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 USP4Q13107 963 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 HLTFQ14527 1009 aaKnown RBP eCLIP23.25■■□□□ 1.31
UFD1-201ENST00000263202 CTC1Q2NKJ3 1217 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 P3H1Q32P28 736 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 ZDHHC24Q6UX98 284 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 ARHGAP36Q6ZRI8 547 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 CHST9Q7L1S5 443 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 NPAS3Q8IXF0 933 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 ZDHHC18Q9NUE0 388 aa23.25■■□□□ 1.31
UFD1-201ENST00000263202 TP73O15350 636 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 MAFKO60675 156 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 GCATO75600 419 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 ZNF189O75820 626 aaPredicted RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 ITIH2P19823 946 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 CHKAP35790 457 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 ATPAF2Q8N5M1 289 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 ADAM7Q9H2U9 754 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 RASA4BC9J798 803 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 RASA4O43374 803 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 TBX10O75333 385 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 ERLIN1O75477 346 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 CCNCP24863 283 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 CLCN6P51797 869 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 DLX2Q07687 328 aaPredicted RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 WASHC5Q12768 1159 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 CALCOCO2Q13137 446 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 IZUMO3Q5VZ72 239 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 LRRC49Q8IUZ0 686 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 CCDC13Q8IYE1 715 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 TDRD5Q8NAT2 981 aaKnown RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 HJURPQ8NCD3 748 aaPredicted RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 CCDC110Q8TBZ0 833 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 HNRNPLLQ8WVV9 542 aaKnown RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 FGF13Q92913 245 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 ART4Q93070 314 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 LRRC45Q96CN5 670 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 TMA16Q96EY4 203 aaKnown RBP23.24■■□□□ 1.31
UFD1-201ENST00000263202 HMCESQ96FZ2 354 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 FERMT1Q9BQL6 677 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 S1PR5Q9H228 398 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 PAK5Q9P286 719 aa23.24■■□□□ 1.31
UFD1-201ENST00000263202 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 KCNK1O00180 336 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 RNF103O00237 685 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 SOX1O00570 391 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 DNALI1O14645 258 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 RAMP2O60895 175 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 TBL1XO60907 577 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 ACTN2P35609 894 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 PLTPP55058 493 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 YBEYP58557 167 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 POLD3Q15054 466 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 PARP15Q460N3 678 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 GET4Q7L5D6 327 aaPredicted RBP23.23■■□□□ 1.31
UFD1-201ENST00000263202 FBXO25Q8TCJ0 367 aa23.23■■□□□ 1.31
UFD1-201ENST00000263202 AENQ8WTP8 325 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms