RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MAFBQ9Y5Q3 323 aaPredicted RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 FAM159BA6NKW6 160 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CLDN5O00501 218 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CILPO75339 1184 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CKMT2P17540 419 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 AOC1P19801 751 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 BACE1P56817 501 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 WASHC5Q12768 1159 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 ACAD9Q9H845 621 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CHRAC1Q9NRG0 131 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 LMO2P25791 158 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 NDUFV1P49821 464 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 APOBEC3FQ8IUX4 373 aaKnown RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 ZFAND2BQ8WV99 257 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 CELF6Q96J87 481 aaKnown RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 SOX17Q9H6I2 414 aaPredicted RBP13.29□□□□□ -0.28
SNX1-201ENST00000261889 TASP1Q9H6P5 420 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
SNX1-201ENST00000261889 A0A096LPK6 155 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 NRP1O14786 923 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 SERPINE1P05121 402 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 PTPRAP18433 802 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 DSELQ8IZU8 1212 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 OR9I1Q8NGQ6 314 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 EXT2Q93063 718 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 TBCBQ99426 244 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 CIB1Q99828 191 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 TCF7L2Q9NQB0 619 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 IARS2Q9NSE4 1012 aaKnown RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 RPL26L1Q9UNX3 145 aaKnown RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 CCL22O00626 93 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MED7O43513 233 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX1-201ENST00000261889 PIGNO95427 931 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 PIK3R1P27986 724 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MYBPC3Q14896 1274 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 GSTA3Q16772 222 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 IL23RQ5VWK5 629 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 FSTL4Q6MZW2 842 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MAP7D3Q8IWC1 876 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 RNF169Q8NCN4 708 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 LPAR1Q92633 364 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MCRS1Q96EZ8 462 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 CSPG4P5Q96PW8 444 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 APBA2Q99767 749 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 GATA5Q9BWX5 397 aaPredicted RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 BOLA2-SMG1P6H3BVE0 249 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 GABRB2P47870 512 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 TAP1Q03518 808 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 IFRD2Q12894 506 aaPredicted RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 ANKDD1AQ495B1 522 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 DCAF6Q58WW2 860 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 MTX3Q5HYI7 312 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 KCTD4Q8WVF5 259 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 ARNTL2Q8WYA1 636 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 PPWD1Q96BP3 646 aaKnown RBP13.28□□□□□ -0.28
SNX1-201ENST00000261889 P2RY11Q96G91 374 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 TEX13BQ9BXU2 312 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 PIF1Q9H611 641 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 SNX13Q9Y5W8 968 aa13.28□□□□□ -0.28
SNX1-201ENST00000261889 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 FAM72CH0Y354 149 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ZNF195O14628 629 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 KLF11O14901 512 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 FKBP6O75344 327 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 RNASEH2AO75792 299 aaKnown RBP13.27□□□□□ -0.28
SNX1-201ENST00000261889 ASLP04424 464 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 AKAP5P24588 427 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 PTPN7P35236 360 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 CTBP1Q13363 440 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ARL13AQ5H913 290 aaPredicted RBP13.27□□□□□ -0.28
SNX1-201ENST00000261889 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ARHGAP17Q68EM7 881 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 FAM72BQ86X60 149 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 HTR3CQ8WXA8 447 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ZNF518BQ9C0D4 1074 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 NRBP2Q9NSY0 501 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 DNAAF2Q9NVR5 837 aaKnown RBP13.27□□□□□ -0.28
SNX1-201ENST00000261889 KLHL8Q9P2G9 620 aaPredicted RBP13.27□□□□□ -0.28
SNX1-201ENST00000261889 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ZDHHC2Q9UIJ5 367 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.28
SNX1-201ENST00000261889 C9IYK1 514 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 SLC5A2P31639 672 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 GJA9P57773 515 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms