RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 XPR1Q9UBH6 696 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 NENFQ9UMX5 172 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 BTRCQ9Y297 605 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 COQ4Q9Y3A0 265 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 N4BP2Q86UW6 1770 aaPredicted RBP10.32□□□□□ -0.76
PALB2-201ENST00000261584 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 SPATA31A6Q5VVP1 1343 aa10.32□□□□□ -0.76
PALB2-201ENST00000261584 C3orf70A6NLC5 250 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 PPEF2O14830 753 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 GSTA4O15217 222 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 EDN1P05305 212 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 SPATA31D3P0C874 917 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 HSPA8P11142 646 aaKnown RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 MUTP22033 750 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 NDUFV1P49821 464 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 MAXP61244 160 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 DAB2P98082 770 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 MADCAM1Q13477 382 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 NOMO1Q15155 1222 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 TBCELQ5QJ74 424 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 SPATA31D4Q6ZUB0 917 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 DSELQ8IZU8 1212 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 FBXW8Q8N3Y1 598 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 MAGEE2Q8TD90 523 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 ESAMQ96AP7 390 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 ACE2Q9BYF1 805 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 DNAI2Q9GZS0 605 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 RERGLQ9H628 205 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.31□□□□□ -0.76
PALB2-201ENST00000261584 TTC24A2A3L6 582 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 ADCY6O43306 1168 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 VDRP11473 427 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 ZNF143P52747 638 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 LBRQ14739 615 aaKnown RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 MAP1SQ66K74 1059 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 B3GNT6Q6ZMB0 384 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 MILR1Q7Z6M3 343 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 TSPAN14Q8NG11 270 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 URGCPQ8TCY9 931 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 CRYGNQ8WXF5 182 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 FICDQ9BVA6 458 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 SETD4Q9NVD3 440 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 HACD3Q9P035 362 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 MFSD11O43934 449 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 NAA20P61599 178 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 PITX1P78337 314 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 IER5Q5VY09 327 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 OTOP3Q7RTS5 596 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 GPR141Q7Z602 305 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 ANKRD23Q86SG2 305 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 DENND6AQ8IWF6 608 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 PTCD3Q96EY7 689 aaKnown RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 CERS2Q96G23 380 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 GATA5Q9BWX5 397 aaPredicted RBP10.31□□□□□ -0.76
PALB2-201ENST00000261584 GPRC5DQ9NZD1 345 aa10.31□□□□□ -0.76
PALB2-201ENST00000261584 DYNC1LI2O43237 492 aaPredicted RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 KCNA2P16389 499 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 HSD17B4P51659 736 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 ITGADQ13349 1161 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 SEMA5AQ13591 1074 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 TMTC4Q5T4D3 741 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 KLC3Q6P597 504 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 BLOC1S5Q8TDH9 187 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 AFG1LQ8WV93 481 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 LENG1Q96BZ8 264 aaPredicted RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 SDCCAG3Q96C92 435 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 ZNF229Q9UJW7 825 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 STAP1Q9ULZ2 295 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 PLIN3O60664 434 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 SH3BGRLO75368 114 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 NFKB1P19838 968 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 MPP1Q00013 466 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 BFSP2Q13515 415 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 DGCR6Q14129 220 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 FASTKQ14296 549 aaKnown RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 ANGPTL8Q6UXH0 198 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 EFHBQ8N7U6 833 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 SLC4A11Q8NBS3 891 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 OR52K2Q8NGK3 314 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 RMND5BQ96G75 393 aaPredicted RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 ACO2Q99798 780 aaKnown RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 COPG2Q9UBF2 871 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 ACOT9Q9Y305 439 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 TSC22D4Q9Y3Q8 395 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 DGKBQ9Y6T7 804 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 SYCE1LA8MT33 242 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 TOR1BO14657 336 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 MT-CYBP00156 380 aaPredicted RBP10.3□□□□□ -0.76
PALB2-201ENST00000261584 USP17L7P0C7H9 530 aa10.3□□□□□ -0.76
PALB2-201ENST00000261584 RPL5P46777 297 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms