RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 PGAM1P18669 254 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 RHOAP61586 193 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 PITX1P78337 314 aaPredicted RBP13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 BFSP2Q13515 415 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 GALNTL6Q49A17 601 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 DEFB107AQ8IZN7 70 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 TDRD5Q8NAT2 981 aaKnown RBP13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 BPIFA1Q9NP55 256 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 TLR8Q9NR97 1041 aaKnown RBP13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 TMEM59LQ9UK28 342 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
HS6ST1-201ENST00000259241 SYNDIG1LA6NDD5 238 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ARL5CA6NH57 179 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ENTPD5O75356 428 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 E2F6O75461 281 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TBX18O95935 607 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ZCCHC18P0CG32 403 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 RENBPP51606 427 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CASS4Q9NQ75 786 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 GLI3P10071 1580 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 A8MUI8 341 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 PAGE1O75459 146 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 LRIG2O94898 1065 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 KLHL2O95198 593 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 SERPINF2P08697 491 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 HSPA8P11142 646 aaKnown RBP13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CD151P48509 253 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 SEL1L3Q68CR1 1132 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 NEPROQ6NW34 567 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 KCTD4Q8WVF5 259 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 SERPINB11Q96P15 392 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 PLA2G4CQ9UP65 541 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TJP1Q07157 1748 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 PIGNO95427 931 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 LRG1P02750 347 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 URODP06132 367 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 OR1D2P34982 312 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 CXCR3P49682 368 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 TRIML2Q8N7C3 387 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 DNAJC9Q8WXX5 260 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.316e-7■■■■□ 19.6
HS6ST1-201ENST00000259241 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
HS6ST1-201ENST00000259241 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 A0A1W2PQH9 124 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 MTA2O94776 668 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 CCND1P24385 295 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 RAB27AP51159 221 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 KRT33BQ14525 404 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 AGAP9Q5VTM2 703 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 RFWD3Q6PCD5 774 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 SCIMPQ6UWF3 145 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 DNM1LO00429 736 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 TRIM13O60858 407 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 KATNA1O75449 491 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 ATP6V1G2O95670 118 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 RAG1P15918 1043 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 SLC25A3Q00325 362 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 TAF10Q12962 218 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 TUSC3Q13454 348 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 CCNJLQ8IV13 435 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 ZDHHC14Q8IZN3 488 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 SNX19Q92543 992 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 TTC24A2A3L6 582 aaPredicted RBP13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 NCAM2O15394 837 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 PIGRP01833 764 aa13.09□□□□□ -0.31
HS6ST1-201ENST00000259241 PROCP04070 461 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms