RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TCTN1Q2MV58 587 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 MFSD5Q6N075 450 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 TRMT10BQ6PF06 316 aaKnown RBP8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 LVRNQ6Q4G3 990 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 UNC5AQ6ZN44 842 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 RAPH1Q70E73 1250 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 UNC5BQ8IZJ1 945 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 GSDMBQ8TAX9 411 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 ATP2A3Q93084 1043 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 NT5C3BQ969T7 300 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 TSNARE1Q96NA8 513 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 ZYG11BQ9C0D3 744 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 VPS11Q9H270 941 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 C12orf65Q9H3J6 166 aaKnown RBP8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
CALCOCO2-201ENST00000258947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 I6L893 689 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 FAM107AO95990 144 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PYGBP11216 843 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 DNAJC3Q13217 504 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 ANO4Q32M45 955 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 TEX44Q53QW1 395 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 HECTD3Q5T447 861 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 NAPEPLDQ6IQ20 393 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PRPF39Q86UA1 669 aaKnown RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC26A11Q86WA9 606 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 VSIG1Q86XK7 387 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 CCDC197Q8NCU1 140 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 EBNA1BP2Q99848 306 aaKnown RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 TMEM175Q9BSA9 504 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PITPNM3Q9BZ71 974 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC39A8Q9C0K1 460 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 ENTPD7Q9NQZ7 604 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 C20orf96Q9NUD7 363 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SYBUQ9NX95 663 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPG21Q9NZD8 308 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SENP1Q9P0U3 644 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 MKI67P46013 3256 aaKnown RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 CCDC195A0A1B0GUA6 201 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 ERVK-10P10266 1014 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 FGFR3P22607 806 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PSEN1P49768 467 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PAPOLAP51003 745 aaKnown RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 EPHB3P54753 998 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 ZBTB17Q13105 803 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 POLD3Q15054 466 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 PAFAH1B3Q15102 231 aaKnown RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 RASIP1Q5U651 963 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 C16orf59Q7L2K0 433 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 C10orf67Q8IYJ2 551 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 BBS5Q8N3I7 341 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 BCL7CQ8WUZ0 217 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 TMEM109Q9BVC6 243 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 MUC3BQ9H195 1237 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 SMYD2Q9NRG4 433 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 GKN1Q9NS71 199 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.98
CALCOCO2-201ENST00000258947 CNTN5O94779 1100 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 LRG1P02750 347 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 F7P08709 466 aaPredicted RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 SNRPAP09012 282 aaKnown RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 HAPLN1P10915 354 aaPredicted RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 RPA3P35244 121 aaPredicted RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 ZNF135P52742 658 aaPredicted RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 WASHC5Q12768 1159 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 TWF1Q12792 350 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 GPNMBQ14956 572 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 CERCAMQ5T4B2 595 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 MARC1Q5VT66 337 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 TRABD2AQ86V40 505 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 CAND1Q86VP6 1230 aaKnown RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 NDUFAF2Q8N183 169 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 LZTR1Q8N653 840 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 BTN2A3PQ96KV6 586 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 FAM111AQ96PZ2 611 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 HAPLN3Q96S86 360 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 NDFIP2Q9NV92 336 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 SLC17A6Q9P2U8 582 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 TRHDEQ9UKU6 1024 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 SMG5Q9UPR3 1016 aaKnown RBP8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 TLR6Q9Y2C9 796 aa8.9□□□□□ -0.99
CALCOCO2-201ENST00000258947 TNFRSF10BO14763 440 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 DGKIO75912 1065 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 TYK2P29597 1187 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 SCAPQ12770 1279 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 THOC5Q13769 683 aaKnown RBP8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 LRRC26Q2I0M4 334 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 CCDC91Q7Z6B0 441 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 IFT43Q96FT9 208 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 GCNAQ96QF7 691 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 PRDM16Q9HAZ2 1276 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 ZNF487B1APH4 448 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 CBX4O00257 560 aa8.89□□□□□ -0.99
CALCOCO2-201ENST00000258947 UGT1A9O60656 530 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms