RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CXCL8P10145 99 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 GP5P40197 560 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 PTGER2P43116 358 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 FAM83EQ2M2I3 478 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 ARL13AQ5H913 290 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 SLC39A4Q6P5W5 647 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 RELL1Q8IUW5 271 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 OR6P1Q8NGX9 317 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 B3GNT5Q9BYG0 378 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 SOX17Q9H6I2 414 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 PCDH12Q9NPG4 1184 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 COQ4Q9Y3A0 265 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 TMEM233B4DJY2 109 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 ZBTB14O43829 449 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 H6PDO95479 791 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 PRKCBP05771 671 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 PCNAP12004 261 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CDKL1Q00532 357 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 DGCR6Q14129 220 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 BOLA3Q53S33 107 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 XKR3Q5GH77 459 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 DHFR2Q86XF0 187 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.58□□□□□ -0.4
USP30-201ENST00000257548 SMYD1Q8NB12 490 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 ELMO1Q92556 727 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 IFT43Q96FT9 208 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 MID2Q9UJV3 735 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 BARX2Q9UMQ3 279 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 AKT3Q9Y243 479 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 ATRNL1Q5VV63 1379 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 CAPN14A8MX76 684 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 MRASO14807 208 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 HDAC3O15379 428 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 BUD23O43709 281 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 ALBP02768 609 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 PSMB4P28070 264 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 TRPC1P48995 793 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ATXN1P54253 815 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 STX5Q13190 355 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 FASTKQ14296 549 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 TMEM26Q6ZUK4 368 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 BNIPLQ7Z465 357 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 METTL25Q8N6Q8 603 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ELMO2Q96JJ3 720 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 RAB26Q9ULW5 256 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 VNN1O95497 513 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 TRUB2O95900 331 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 ERBB2P04626 1255 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ASNSP08243 561 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 GJA8P48165 433 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 SLC7A2P52569 658 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 XIAPP98170 497 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 CSHL1Q14406 222 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 SETD3Q86TU7 594 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 ZNF410Q86VK4 478 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 PLD5Q8N7P1 536 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 PDCD2LQ9BRP1 358 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 GATA5Q9BWX5 397 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 SIRPGQ9P1W8 387 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 GJB1P08034 283 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ADRA2BP18089 450 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 TFEBP19484 476 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 RXRGP48443 463 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 MYBPC1Q00872 1141 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 STILQ15468 1287 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 SCARA3Q6AZY7 606 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms