RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 EMCNQ9ULC0 261 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
USHBP1-201ENST00000252597 STYXL1Q9Y6J8 313 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 H3BSA7 217 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 PIK3R1P27986 724 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 CTBP1Q13363 440 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 DBN1Q16643 649 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 SOWAHAQ2M3V2 549 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 KYQ8NBH2 561 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 ATP6V1E2Q96A05 226 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 PHF21BQ96EK2 531 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 MCRS1Q96EZ8 462 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
USHBP1-201ENST00000252597 SERPINI1Q99574 410 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 SLC39A3Q9BRY0 314 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 ILKAPQ9H0C8 392 aaPredicted RBP12.24□□□□□ -0.45
USHBP1-201ENST00000252597 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
USHBP1-201ENST00000252597 TIMM13Q9Y5L4 95 aaPredicted RBP12.24□□□□□ -0.45
USHBP1-201ENST00000252597 ZNFX1Q9P2E3 1918 aaKnown RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 KLHL33A6NCF5 533 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SAC3D1A6NKF1 404 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC4A1P02730 911 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 C2P06681 752 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 INSRRP14616 1297 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC6A3Q01959 620 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CYLC2Q14093 348 aaPredicted RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 PDK2Q15119 407 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 DSELQ8IZU8 1212 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC2A14Q8TDB8 520 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CERS2Q96G23 380 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 GATA5Q9BWX5 397 aaPredicted RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 TMEM165Q9HC07 324 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 JUNP05412 331 aaKnown RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 PRKCHP24723 683 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 GRIA4P48058 902 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CXCR3P49682 368 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 RBP5P82980 135 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 PCSK7Q16549 785 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SEL1L3Q68CR1 1132 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC9A4Q6AI14 798 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 GK5Q6ZS86 529 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 SLC7A14Q8TBB6 771 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 EDEM1Q92611 657 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 TRIM8Q9BZR9 551 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 LHX5Q9H2C1 402 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 TMEM134Q9H6X4 195 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 NMRAL1Q9HBL8 299 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
USHBP1-201ENST00000252597 EFR3BQ9Y2G0 817 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CDY2AQ9Y6F7 541 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CDY1Q9Y6F8 540 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 NFASCO94856 1347 aa12.23□□□□□ -0.45
USHBP1-201ENST00000252597 CRTAMO95727 393 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 JCHAINP01591 159 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ARF4P18085 180 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 LMO2P25791 158 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 GP5P40197 560 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 NDUFV1P49821 464 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ADIGQ0VDE8 80 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 GPR162Q16538 588 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ARL13AQ5H913 290 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FSTL4Q6MZW2 842 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 MOB2Q70IA6 237 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 GRIN3AQ8TCU5 1115 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 CIB1Q99828 191 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SNX25Q9H3E2 840 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 WDR41Q9HAD4 459 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FETUBQ9UGM5 382 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FAM149AA5PLN7 773 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 AKAP10O43572 662 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 TRIM13O60858 407 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 MT-ND1P03886 318 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 AOC1P19801 751 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 LSM12Q3MHD2 195 aaKnown RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FBXO48Q5FWF7 155 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 RNF169Q8NCN4 708 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FNIP1Q8TF40 1166 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 EMID1Q96A84 441 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 PKP2Q99959 881 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FRMD8P1Q9BZ68 369 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 UBAP1Q9NZ09 502 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 TUBGCP4Q9UGJ1 667 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 KPNA7A9QM74 516 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms